Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0354 ATGAGCGAGCGTGAGTTTGAGGGCACGACTGTTTATTCAGATAGGATGCAGCTTCAGCTCTACGCCCATCCAGCAGTGGCGGAGGCTCCGACTGCCAGAAGCTCTCGCTATTCCATGGGCACCTTCTTCTATGCTCTCTTTATTCTATCTCTACTCTTCTCCACAGTCGGAGCAGATGATGATTCTTCGATCGTCTCCAGGTTCCAACGCTACCTCCAGATCAACACTGCCCAACCAAACCCTAACTACTATGAAGCTGCCGATTTCATCGTCTCTCAAGCTCAATCCATCTCTCTCCATTCCCAAACCCTCGAGTTCGTCAAGGGGAAACCTATTGTTCTCCTCAAATGGCCCGGCTCTAACCCGAATCTCCCCTCCATCCTCCTCAACTCCCACACCGACGTTGTTCCGGCTGAGCATCATAAATGGACTCACCCTCCGTTCGATGCTCATGTTGATGGAAACGGCGACATCTACGCCAGGGGGTCTCAGGACATGAAGTGTGTTGGTCTGCAGTACCTGGAAGCCATTCGCCGGCTCAAGAGTTCTGGATTTCAGCCGCTTCGAACAGTGTACTTGTCGTTTGTTCCCGATGAGGAGATTGGCGGACACGACGGCGCGGAGAAATTCGCTGATTCGGATGAGTTCAAGAAGATGAATGTTGGAATAGTGCTTGATGAAGGTTTGGCTTCTCCGAATGAGAATTACAGGGCGTTTTATGCGGAGAGGAGTCCGTGGTGGCTGGTAATCAGGGCTACTGGAGCTCCCGGACACGGGGCGAAGCTGTATGACAACACTGCCATGGAGAACATTCTGAAGAGCATTGAGAGTGTGAGGAGGTTTCGGGCAGCACAGTTTGATTTGGTGAAGTCGGGTTTGAAGAGTGAAGGCGAGGTTATCTCGGTCAATATGGTTTTCCTGAAGGCTGGCACACCATCCCCAACTGGCTTTGTCATGAACTTGCAGCCTTCTGAGGCAGAGGCTGGTTTTGACATCCGGATCCCACCAACTGCTGATCAAGTATCCTTGGAGAAACGGATTGCTGAGGAATGGGCACCTGCTTCACGGAACATGACATTTGAGCTTGGGCAGTTTAAGCAAAAGGTTTCAGTGTATGACAAGTTTGGGAAGCCAGTCCTCACAGCTACAGACAGTTCTAATCCATGGTGGACCTTATTAGAAGAAGCTGTGAAGAAAGTCAATGAAAAACTTGGAAGGCCAGAGATCTTTCCTGCCTCAACTGATGCTCGCTATTTCCGGCAACTGGGCTTGCCAGCAATTGGCTTCTCCCCTATGAAAAACACACCTATTCTACTTCATGACCATAATGAGTTTCTGAACCAGGCTGAGTACCTGAGAGGAATTGAGATCTATGAGTCGATAATCAAAGCTTATGCATCTTTCAACGAACATACAAGAGATGAAGACCGCAAAGAAGAATTGTGA 1446 0.4945 MSEREFEGTTVYSDRMQLQLYAHPAVAEAPTARSSRYSMGTFFYALFILSLLFSTVGADDDSSIVSRFQRYLQINTAQPNPNYYEAADFIVSQAQSISLHSQTLEFVKGKPIVLLKWPGSNPNLPSILLNSHTDVVPAEHHKWTHPPFDAHVDGNGDIYARGSQDMKCVGLQYLEAIRRLKSSGFQPLRTVYLSFVPDEEIGGHDGAEKFADSDEFKKMNVGIVLDEGLASPNENYRAFYAERSPWWLVIRATGAPGHGAKLYDNTAMENILKSIESVRRFRAAQFDLVKSGLKSEGEVISVNMVFLKAGTPSPTGFVMNLQPSEAEAGFDIRIPPTADQVSLEKRIAEEWAPASRNMTFELGQFKQKVSVYDKFGKPVLTATDSSNPWWTLLEEAVKKVNEKLGRPEIFPASTDARYFRQLGLPAIGFSPMKNTPILLHDHNEFLNQAEYLRGIEIYESIIKAYASFNEHTRDEDRKEEL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0354 481 PIRSF ACY-1 54 470 - -
Vvi3g0354 481 FunFam Aminoacylase-1, putative 387 468 - -
Vvi3g0354 481 Gene3D Zn peptidases 56 246 - -
Vvi3g0354 481 NCBIfam N-acyl-aliphatic-L-amino acid amidohydrolase 55 468 IPR010159 GO:0004046|GO:0005737|GO:0006520
Vvi3g0354 481 Gene3D - 247 357 - -
Vvi3g0354 481 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 127 136 IPR001261 -
Vvi3g0354 481 PANTHER AMINOACYLASE-1 57 470 - -
Vvi3g0354 481 CDD M20_AcylaseI_like 61 466 - -
Vvi3g0354 481 SUPERFAMILY Zn-dependent exopeptidases 62 466 - -
Vvi3g0354 481 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 163 202 IPR001261 -
Vvi3g0354 481 Gene3D - 387 468 - -
Vvi3g0354 481 FunFam aminoacylase-1 isoform X1 247 358 - -
Vvi3g0354 481 FunFam Aminoacylase 1 56 247 - -
Vvi3g0354 481 Pfam Peptidase family M20/M25/M40 128 463 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0354 Vvi-Chr3 2924082 2927204 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0354 K14677 - vvi:100260562 970.689