Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0351 ATGGAGAGCTCATCTGAATTGGTGGCCTTCCCTTTGCTACTGACTCCGATCGAATCCAACTACAGGGCATGCACTATTCCCTATAGATTCCCCTCTGATAATCCCCGGAAGGCAACCCCTACTGAGCTTTCCTGGATTGATCTTTTCCTCAATTCCATCCCCTCTTTCAGGAAACGAGCAGAGAGTGATGGAACTGTTGCTGATGCTAATGTTAAAGCTGAAAAATTTGCTCAAAGGTACTCCGAAATACTAGAGGACCTTAAGAAGGACCCTGAAAGTCATGGTGGGCCACCTGATTGCGTTCTTCTCTGCAGGCTTCGCGAACAAGTTCTTAGAGAATTGGGATTCAGAGATATATTCAAGAAAGTTAAGGATGAAGAGAACGCTAAGGCTATATCCCTATTTGAGAATGTTGTTCATCTTAATGATGCCATTGAAGATGAAAGCAAGCGTTTGGAGAATCTGGTTAGAGGGATTTTTGCGGGGAACATATTTGATCTTGGTTCTGCACAGCTTGCAGAGGTTTTCTCAAAGGATGGGATGTCCTTTCTGGCTAGTTGTCAGAACCTTGTCCCTCGACCTTGGGTTATTGATGATTTGGACTCTTTTAAACTGAAATGGAGTAGAAAATCTTGGAAAAAGGTAATAATTTTTGTTGATAATTCTGGTGCGGACATCATTTTGGGTATTTTGCCGTTTGCAAGAGAGTTACTCCGATGTGGGTCACAGGTTGTCTTGGCAGCTAACGATTTACCTTCAATCAATGATGTAACTTACCCTGAACTAATTGAGATAATAGCAAAGTTGAAGGATGAAAATGGGCAGCTGGTGGGTGTTGATACTTCTAATCTTTTGATTGCCAATTCTGGTAATGATTTACCGGTTATTGATCTTACAAGAATATCGCAAGAGCTTGCCTACCTGGCTAGTGATGCTGACCTTGTCATATTGGAAGGAATGGGTCGTGGAATAGAGACAAACCTTTATGCTCAATTTAAGTGTGATTCACTCAAAATTGGAATGGTGAAGCATCTAGAGGTTGCCCAGTTCCTTGGAGGGCGGCTTTATGACTGTGTCTTCAAATACAATGAAGTTTTGAGTTAA 1104 0.4194 MESSSELVAFPLLLTPIESNYRACTIPYRFPSDNPRKATPTELSWIDLFLNSIPSFRKRAESDGTVADANVKAEKFAQRYSEILEDLKKDPESHGGPPDCVLLCRLREQVLRELGFRDIFKKVKDEENAKAISLFENVVHLNDAIEDESKRLENLVRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLDSFKLKWSRKSWKKVIIFVDNSGADIILGILPFARELLRCGSQVVLAANDLPSINDVTYPELIEIIAKLKDENGQLVGVDTSNLLIANSGNDLPVIDLTRISQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAQFLGGRLYDCVFKYNEVLS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0351 367 PIRSF UCP030210 7 367 IPR016949 -
Vvi3g0351 367 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 196 366 - -
Vvi3g0351 367 FunFam Pantothenate kinase 4 28 117 - -
Vvi3g0351 367 Pfam Damage-control phosphatase ARMT1-like domain 52 355 IPR002791 -
Vvi3g0351 367 SUPERFAMILY AF1104-like 10 364 IPR036075 -
Vvi3g0351 367 FunFam Pantothenate kinase 196 364 - -
Vvi3g0351 367 Gene3D Uncharacterised protein PF01937, DUF89, domain 2 118 186 - -
Vvi3g0351 367 PANTHER PANTOTHENATE KINASE 12 280 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vvi3g0351 367 Gene3D - 28 117 IPR035073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0351 Vvi-Chr3 2913336 2918332 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0351 K24854 - vvi:100265775 727.243