Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0349 ATGGAGTATAGGAAGCTCAAAGATCTGGACAAAGATGGTGGTGCAGGTGGTGATGATATAGAGAGCCTACGAGGGAAAGCTCTTTCTGGTGCTCATACAAATAATATGGCAACCTTGGGAGGCCACTCAATTGACCGCACCAAGTGGAAGCGCAAGTCCATTGTTACACTTGCATTGACTGTTCTTACGAGTTCACAAGCCATACTAATTGTCTGGTCCAAGAGAGCCGGAAAGTACGAGTATAGTGTGACAACTGCTAATTTTTTGGTGGAGACTTTGAAATGCGCATTATCACTAGCTGCCCTGGTAAGGATCTGGGGGAATGAAGGTGTTACTGATGATAACAGGTTGAGTTCATCATTGGACGAAGTTATCGTTTTCCCTATACCTGCAGCACTTTACCTCGTTAAAAATTTACTTCAGTATTACATCTTTGCATATGTAGATGCTCCAGGTTATCAGATACTAAAGAACCTGAATATCATCAGCACTGGTGTGTTATATCGAATTATTCTCAAGAAGAAGTTAAGTGAAATACAGTGGGCAGCTTTCATTCTACTATGTGCTGGTTGCACTACAGCACAACTTAATCCCTCTTCTGATCATGTTCTTCAAGCACCTTTTCAAGGTTGGATGATGGCCATTGTAATGGCACTTCTAAGTGGCTTTGCTGGAGTATACACAGAGGCCATAATTAAAAAGCGTCCATCAAGAAACATAAATGTGCAGAACTTCTGGTTGTATGTCTTTGGGATGGTCTTCAATGCTGTTGCAATAGTGATTCAAGATTTTGATGCCGTCATGAACAAGGGGTTCTTCCATGGATACTCATTAATTACAGTTCTCATGATTGTCAACCATGCACTGAGTGGAATTGCAGTGTCTATGGTAATGAAGTATGCTGACAATATTGTGAAGGTGTATTCTACCTCAGTGGCGATGCTCCTCACCGCACTTGTTTCTGTATTTCTGTTTGGTTTTCATCTCTCCCTCGCCTTCTTCCTCGGCTCAACTGTTGTCTCTGTCTCAATATATTTGCACTCCATTGGAAAGCTGCAAAGATGA 1065 0.4188 MEYRKLKDLDKDGGAGGDDIESLRGKALSGAHTNNMATLGGHSIDRTKWKRKSIVTLALTVLTSSQAILIVWSKRAGKYEYSVTTANFLVETLKCALSLAALVRIWGNEGVTDDNRLSSSLDEVIVFPIPAALYLVKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKKKLSEIQWAAFILLCAGCTTAQLNPSSDHVLQAPFQGWMMAIVMALLSGFAGVYTEAIIKKRPSRNINVQNFWLYVFGMVFNAVAIVIQDFDAVMNKGFFHGYSLITVLMIVNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTALVSVFLFGFHLSLAFFLGSTVVSVSIYLHSIGKLQR* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0349 354 PANTHER NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER 52 349 IPR007271 GO:0000139|GO:0015165|GO:0016020|GO:0090481
Vvi3g0349 354 Pfam Nucleotide-sugar transporter 52 347 IPR007271 GO:0000139|GO:0015165|GO:0016020|GO:0090481
Vvi3g0349 354 NCBIfam UDP-galactose transporter 129 346 - -
Vvi3g0349 354 PIRSF UDP-gal_transpt 31 353 IPR007271 GO:0000139|GO:0015165|GO:0016020|GO:0090481
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0349 Vvi-Chr3 2903559 2909275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0349 55 347 Organic Solute Cotransporters AT5G41760 41.118 1.58e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0349 K15272 K16290 vvi:100248746 678.322