Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0344 ATGTCTCTCATCGGAGCCACGTTCATCACTACTATCTCTGGAGCAGTATCTGATTGGCTTGGGCGCCGCCCTATGTTGATAATCTCATCCCTATTTTATTTTGTCAGTGGCCTTGTGATGCTGTGGTCTCCCAATGTTTATGTGCTGCTGTTGGCAAGGCTTCTGGATGGATTTGGGGTTGGGCTGTCAGTTACTATTGTTCCGGTCTATATATCTGAGACTGCACCCTCTGAAATAAGGGGATTGTTGAATACCCTCCCTCAGTTCACTGGTTCTGTTGGAATGTTTTTGTCTTACTGCATGGTTTTTGGGATGTCACTGATGAATTCACCAAGCTGGAGGTTAATGCTTGGGGTTCTTTTTATTCCTTCCCTCGTATATTTGGCATTAACGGTATTTTTGTTGCCTGAGTCTCCTCGGTGGCTAGTCAGTAAAGGGCGTATGCTCGAGGCGAAGCATGTATTGCAGAGACTACGCGGCAGGGAGGATGTCTCTGGTGAGATGGCTTTGCTGGTCGAAGGTCTTGGAGTCGGTAGTAAAGCATCTATAGAGGAGTACATAATTGGCCCTGATGATCTCACAGATGACCAGGATCCAGCTGCTATGAATGATAGAATCAGATTATATGGGCCTCAAGAAGGTCTCTCCTGGATTGCTAAACCTGTTACTGGCCAGAGTTCTCTTGGCCTTGTGTCTCGCTGTGGAAGCATGGAAAACAAGCCAGTGCCACTTATGGACCCTCTTGTGACCCTCTTTGGCAGTGTTCACGAGAAGCTTCCTGAGACAGGAAGCATGCGAAGCGTGATCTTTCCAAACTTTAGCAGCATGTTCAGCATATCAGGCAATCAACCTAAAAATGAAGAATCGGATGAAGAGAGCCTTGCCAGAGATGGTGAAGATTATCCATCTGATGCTGCTGGTGGTGATTCTGACGACAACTTGCAAAGTCCATTAATCTCGCGTCAAAATACGAGTTTAGAAAAAGACTTGATGCCTGCTCCAACACAGAGCAGCAATTTAAGCATGAGACACAGCAGTCTAATGCGAGCAGATGGTGGAGAGCAAGTCAGTAGTAGCATGGGAATTGGTGGCGGGTGGCAGCTGGCATGGAAATGGTCAGAAAAAGAAGGTCAAGATGGAAAGAAGGAAGGAGGTTTTAAAAGAATTTATTTGCACCAGGACAGCATCCCTCGATCTCAACGCGGATCTTTAGTTTCTGTTCCAGGTGGTGAGGTCCCTGTTGATGGTGAGATGACCTGCGCTGCTGCTTTGGTAAGTCAACCTGCTCTTTATTCCAAGGAGCTTATGGATCAGAATCCAGTTGGACCAGCTATGGTTCATCCTTCTGAAACTGCTATAAAAGGGCCAAGTTGGAGAGATCTTTTTAAACCAGGAGTCAAGCATGCACTAGTTGTTGGGGTGGGGATTCAGATACTTCAGCAGTTCTCTGGCATAAATGGGGTTCTGTACTACACTCCTCAAATTCTTGAGCAGGCAGGTGTTGGAGTTATTCTTTCAAACATAGGCATTAGTTCAGCCTCTACATCTCTGCTTATCAGTGCAATCACAACCTTGTTGATGCTTCCTTGCATAGCTGTTGCCATGAGGCTCATGGATATTTCTGGTAGAAGGAGTCTGCTGCTCAGCACAATCCCTGTCCTGATAATAGCCCTTTCCATTCTTGTCCTTGGAAGTTTAGTAAATATGGGTGATGTTGTGCATGCTGCAATCTCGACTGCTAGTGTCATCATCTACTTCTGTTGCTTTGTCATGGGATTTGGGCCAGTCCCAAACATACTCTGTGCGGAGATCTTTCCCACCCGTGTCCGAGGCCTATGCATTGCCATTTGTGCACTCTCATTTTGGATTGGTGACATCATTGTAACCTACACACTGCCATTGATGCTCACCTCTGTTGGCCTTGCTGGTGTCTTTGGCATGTACGCCGTTGTGTGCCTCATCTCATGGGTGTTCGTCTTCTTGAAAGTCCCAGAAACCAAAGGCATGCCCCTTGAAGTTATCTCTGAGTTCTTTGCTGTTGGTGCAAGTGCTGGACAGAAGAAGAACTGA 2070 0.4657 MSLIGATFITTISGAVSDWLGRRPMLIISSLFYFVSGLVMLWSPNVYVLLLARLLDGFGVGLSVTIVPVYISETAPSEIRGLLNTLPQFTGSVGMFLSYCMVFGMSLMNSPSWRLMLGVLFIPSLVYLALTVFLLPESPRWLVSKGRMLEAKHVLQRLRGREDVSGEMALLVEGLGVGSKASIEEYIIGPDDLTDDQDPAAMNDRIRLYGPQEGLSWIAKPVTGQSSLGLVSRCGSMENKPVPLMDPLVTLFGSVHEKLPETGSMRSVIFPNFSSMFSISGNQPKNEESDEESLARDGEDYPSDAAGGDSDDNLQSPLISRQNTSLEKDLMPAPTQSSNLSMRHSSLMRADGGEQVSSSMGIGGGWQLAWKWSEKEGQDGKKEGGFKRIYLHQDSIPRSQRGSLVSVPGGEVPVDGEMTCAAALVSQPALYSKELMDQNPVGPAMVHPSETAIKGPSWRDLFKPGVKHALVVGVGIQILQQFSGINGVLYYTPQILEQAGVGVILSNIGISSASTSLLISAITTLLMLPCIAVAMRLMDISGRRSLLLSTIPVLIIALSILVLGSLVNMGDVVHAAISTASVIIYFCCFVMGFGPVPNILCAEIFPTRVRGLCIAICALSFWIGDIIVTYTLPLMLTSVGLAGVFGMYAVVCLISWVFVFLKVPETKGMPLEVISEFFAVGASAGQKKN* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0344 689 ProSitePatterns Sugar transport proteins signature 2. 55 80 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vvi3g0344 689 ProSitePatterns Sugar transport proteins signature 1. 13 30 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vvi3g0344 689 MobiDBLite consensus disorder prediction 285 303 - -
Vvi3g0344 689 FunFam Monosaccharide-sensing protein 2 431 680 - -
Vvi3g0344 689 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 667 IPR020846 GO:0022857
Vvi3g0344 689 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 2 685 - -
Vvi3g0344 689 Gene3D MFS general substrate transporter like domains 1 185 IPR036259 -
Vvi3g0344 689 MobiDBLite consensus disorder prediction 279 317 - -
Vvi3g0344 689 Pfam Sugar (and other) transporter 3 178 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi3g0344 689 Pfam Sugar (and other) transporter 455 678 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi3g0344 689 SUPERFAMILY MFS general substrate transporter 3 672 IPR036259 -
Vvi3g0344 689 Gene3D MFS general substrate transporter like domains 434 680 IPR036259 -
Vvi3g0344 689 PRINTS Sugar transporter signature 579 600 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi3g0344 689 PRINTS Sugar transporter signature 480 490 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi3g0344 689 PRINTS Sugar transporter signature 602 614 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vvi3g0344 689 PRINTS Sugar transporter signature 50 69 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0344 Vvi-Chr3 2876197 2880912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0344 1 689 Organic Solute Cotransporters AT4G35300 70.376 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0344 - - vvi:100264011 1340.87