Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0341 ATGGGGAGGCTGAAATTTCCAAAGCGTTACTTGATTGTTATTTTGACGTTCATCTCCACATGTGTTTGTTATGTAGAGCGTGTGGGCTTCTCAATTGCCTATACCGTTGCTGCTGATGCTGCTGGGGTAAACCAATCAAGCAAAGGCACAATACTTTCTACCTTTTACTATGGGTATGCTTGTTCACAGGTGCCCGGAGGATGGGCAGCACAGAAACTAGGAGGAAGGCGTGTTCTTCTCCTCTCATTTGTGTTATGGTCGTTAACTTGTGCTTTATTCCCATTGGACCCAAATCATGTCAGGCTCATAGTGATGGCCCGCTTGCTCGTCGGTGTGGCACAAGGGTTCATTTTCCCCTCCATCCACACTGTTCTTGCACAATGGGTCCCACCCCATGAAAGGTCTAGATCTGTTTCTCTCACAACTTCTGGGATGTACCTAGGGGCAGCTGCAGGAATGCTTGTACTTCCAAGCTTGGTGAAGTACAGGGGCCCCCAATCCGTATTTTTTGCTGAAGCAACATTAGGTGCAATGTGGTCTCTACTGTGGCTCAAATATGCCAGTGACCCTCCTCGAGCTGAATACCCAAAAGCCACTGCCTCTGGTTTTGGGGAATCATTGTTGCCAATGAGAGGAAGTCAGAAGGTAAAAGTGGAGAATGGAGGAAATTCTGTCAAAACTTCCAAAATCCCATGGAAGCGGATTTTCATTAGCTTGCCAGTTTGGGCAATTGTGGTGAATAATTTCACATTTCATTACGCCTTGTATGTGCTGATGAACTGGTTGCCCACATACTTTGAGCTAGGCCTCCGTCTTAGTCTTCAGGAAATGGGTTCTTCTAAGATGTTGCCTTATCTCAACATGTTCATTTTCTCAAACATTGGTGGGGTGGTTGCTGACCATTTGATCACGAAGAGGATCATGTCTGTGACTAAAACCAGGAAGTTCTTGAACACCATAGGATTTATAGTAGCTTCTCTTGCGTTGATGGCACTTCCCACGTTCAGAACTTCTGGTGGGGCTGTGTTTTGTTCTTCTTTGGCTCTTGGTTTCTTGGCTCTAGGGAGAGCTGGGTTTGCTGTGAATCATATGGATGTTGCTCCAAGATATGCAGGAATTGTCATGGGGGTTTCTAATACTGCTGGGACACTAGCTGGCATTGTTGGTGTTGACCTCACTGGCAAACTTCTTGAAGCTGCTCAAATCGCTAATTCTGATCTTTCAGGTCCAGAAAGCTGGAGATTAGTGTTTTTCATCCCAGGGTTGCTCTGCATTTTCAGTTCTTTTGTGTTCTTACTATTCTCGACCGGGGAGAGAATTTTTGACTGA 1329 0.4567 MGRLKFPKRYLIVILTFISTCVCYVERVGFSIAYTVAADAAGVNQSSKGTILSTFYYGYACSQVPGGWAAQKLGGRRVLLLSFVLWSLTCALFPLDPNHVRLIVMARLLVGVAQGFIFPSIHTVLAQWVPPHERSRSVSLTTSGMYLGAAAGMLVLPSLVKYRGPQSVFFAEATLGAMWSLLWLKYASDPPRAEYPKATASGFGESLLPMRGSQKVKVENGGNSVKTSKIPWKRIFISLPVWAIVVNNFTFHYALYVLMNWLPTYFELGLRLSLQEMGSSKMLPYLNMFIFSNIGGVVADHLITKRIMSVTKTRKFLNTIGFIVASLALMALPTFRTSGGAVFCSSLALGFLALGRAGFAVNHMDVAPRYAGIVMGVSNTAGTLAGIVGVDLTGKLLEAAQIANSDLSGPESWRLVFFIPGLLCIFSSFVFLLFSTGERIFD* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0341 442 CDD MFS_SLC17A9_like 13 435 IPR044777 -
Vvi3g0341 442 FunFam Probable anion transporter 7 7 198 - -
Vvi3g0341 442 ProSiteProfiles Major facilitator superfamily (MFS) profile. 12 439 IPR020846 GO:0022857
Vvi3g0341 442 Gene3D MFS general substrate transporter like domains 7 198 IPR036259 -
Vvi3g0341 442 PANTHER SOLUTE CARRIER FAMILY 17 5 439 - -
Vvi3g0341 442 Pfam Major Facilitator Superfamily 17 389 IPR011701 GO:0022857|GO:0055085
Vvi3g0341 442 Gene3D MFS general substrate transporter like domains 238 439 IPR036259 -
Vvi3g0341 442 SUPERFAMILY MFS general substrate transporter 5 435 IPR036259 -
Vvi3g0341 442 FunFam Probable anion transporter 7 238 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0341 Vvi-Chr3 2864534 2865862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0341 5 442 Organic Solute Cotransporters AT5G44370 77.626 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0341 K08193 - vvi:100247004 870.922