Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0340 ATGGTTTTCAGCAAGGAAGCGAGCTCGTCCTCGCATGGCCTCAATCCTATGTCACCAGAAGAAGCGCCACTCCTTCCCAAGCTCAAGCTTCTGTCGTCTCAACCTAAGACCTTCGCCAACGTTTTCATAGCCGTCGTCGGTGCCGGCGTTCTGGGTTTGCCTTACTGTTTCAAGAGGACGGGGTGGGTCGTCAGCCTTCTGATGCTGTTCTCCGTCGCCGCTCTCACCCACCATTGTATGATGCTCCTCGTTCGCACCCGCAGAAGGCTCGAATCCGTTATGGGTTTCACGAATATTGCCTCGTTCGGCGATCTAGGGTTCATCGTTTGCGGTTCGGTCGGGAGGTTCGCCGTCGACCTCATGCTCGTTCTCTCTCAAGCTGGGTTCTGTGTTGGGTATCTCATTTTTATAGCCAATACTCTGGCTAATCTTTTCAATTCGCCCACACCCACGAATCTGCACCCGCGGATCCTGGGATTGATGCCCAAGACTGTGTACATCTGGGGGTGTATCCCCTTCCAATTGGGGTTAAACTCGATCTCAACGCTGACCCATATGGCTCCTCTGAGCATTTTCGCGGATATTGTGGATGTTGGAGCCATGGGAGTGGTGATGATTGAGGATGTGTTCATTTTCTTCAAAAACAGACCTAGTGTGGAGGCTGTTGGGAGCTTATCAATGTTCTTCTATGGCCTGGGCGTGGCTGTTTATGCCTTTGAAGGTGTGGGAATGGTTTTGCCGATAGAATCAGAAACCCAAGAGAGGGAAAAGTTTGGGAAAGTCCTGGCCTTGGCCATGGCTTCAATTTCATTGATGTACGGAGGATTTGGAGCGCTGGGCTACTTCGCATTCGGTGAAGACACAAAAGATATCATCACAGCTAACTTGGGAACAGGGTTGGTGAGCTTCTTAGTCCAACTGGGGCTCTGTGTGAATCTGTTCTTCACATTTCCATTGATGATGAACCCAGTGTATGAGGTGGTTGAGAGAAGATTGTATAATGGGAGATACTGCCTGTGGCTGAGATGGTTGCTTGTTTTGACAGTAATCTTGGTGGCATTGTTGGTTCCAAACTTCACTGATTTCTTGTCTTTGGTTGGGAGCAGTGTCTGCTGTGGATTAGGGTTTGTGTTGCCTGCTCTGTTTCATTTGATGGTGTTCAAGGAAGAAATGGGGTGGGGAGGAGTATCTTTGGATGTAGGTATTGTGGTTGTTGGTGTTGTTTTGGGGGTTTCAGGAACCTGGTATTCTCTGGTGGAGATTTTCTCTGTAAAGGTATGA 1281 0.4918 MVFSKEASSSSHGLNPMSPEEAPLLPKLKLLSSQPKTFANVFIAVVGAGVLGLPYCFKRTGWVVSLLMLFSVAALTHHCMMLLVRTRRRLESVMGFTNIASFGDLGFIVCGSVGRFAVDLMLVLSQAGFCVGYLIFIANTLANLFNSPTPTNLHPRILGLMPKTVYIWGCIPFQLGLNSISTLTHMAPLSIFADIVDVGAMGVVMIEDVFIFFKNRPSVEAVGSLSMFFYGLGVAVYAFEGVGMVLPIESETQEREKFGKVLALAMASISLMYGGFGALGYFAFGEDTKDIITANLGTGLVSFLVQLGLCVNLFFTFPLMMNPVYEVVERRLYNGRYCLWLRWLLVLTVILVALLVPNFTDFLSLVGSSVCCGLGFVLPALFHLMVFKEEMGWGGVSLDVGIVVVGVVLGVSGTWYSLVEIFSVKV* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0340 426 Pfam Transmembrane amino acid transporter protein 33 417 IPR013057 -
Vvi3g0340 426 MobiDBLite consensus disorder prediction 1 20 - -
Vvi3g0340 426 PANTHER AMINO ACID TRANSPORTER 32 411 - -
Vvi3g0340 426 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0340 Vvi-Chr3 2857356 2858636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0340 1 426 Organic Solute Cotransporters AT4G38250 69.266 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0340 K14209 - vvi:100241728 792.727