Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0336 ATGAGCAAGAAGAATCCCATGGAATTTGCAGAGGAAGTTATGAAGGAGGCAGATAAGTATAATGGGTTTAACTTGATAATAGCTGATCTTTGTTCCAAAACTATGATCTATATAACCAACAGACCAAGAGAAGCTAATGTTTCTGTTGTAGAGGTTTCACCTGGTATTCATGTGCTGTCAAATGCAAGTTTGGACTCACCTTGGCCTAAGGCACGAAGACTAGGTCATAATTTCAAAGAGCTCTTGGATAAATATGGTGAAGGTGAGATCCCCACAGAGGAGATGGTTGAGAAATTAATGAAGAACACAATCAAAGACGATGAAATCGTGCTGCCTCGCATCTATCCTCCAGAGAGGGAACACCAGTTAAGCTCCATATTTGTTGACACAGACACCCCACTGGGACGTTATGGCACTAGAAGCACTTCTTCCGTATGTGTGAGAGCAAGTGGGGAGGTCAACTTCTATGAGAAGCACCTTGAAAATGAAACATGGAGAGAGAACACTGTAACTTACCAGATAGAGAGGATGAAGCAGATAGCCTTGGAATCATGA 555 0.4216 MSKKNPMEFAEEVMKEADKYNGFNLIIADLCSKTMIYITNRPREANVSVVEVSPGIHVLSNASLDSPWPKARRLGHNFKELLDKYGEGEIPTEEMVEKLMKNTIKDDEIVLPRIYPPEREHQLSSIFVDTDTPLGRYGTRSTSSVCVRASGEVNFYEKHLENETWRENTVTYQIERMKQIALES* 185
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0336 184 PANTHER SER/THR-RICH PROTEIN T10 IN DGCR REGION 2 176 IPR008551 -
Vvi3g0336 184 Pfam Transport and Golgi organisation 2 3 161 IPR008551 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g0336 Vvi-Chr3 2812534 2814381 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0336 - - vvi:100853903 371.703