Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0331 ATGATCAGTCCAAAGAAGCTCATCAAAATGGCAAGGAAGTGGCAGAGGGATAGCAGCCTTGGGAGGGAAAGAATTTCTTCACCAAGAACCAATGATGATATGGGTGCAAACAGTTGTAGCACATCAGTGGATCATAAAGGCCATTTTGTTGTGTACATTGCTGATCGTAAACGATTTATGCTATGCGTCCCTTCGTGTATCTCAATAATAGCATCTTCAGAGAGCTCTTCAAGATGTCTGAGAAGAGTTTGGATTGCCAAGTGA 264 0.4242 MISPKKLIKMARKWQRDSSLGRERISSPRTNDDMGANSCSTSVDHKGHFVVYIADRKRFMLCVPSCISIIASSESSSRCLRRVWIAK* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0331 87 Pfam Auxin responsive protein 5 62 IPR003676 GO:0009733
Vvi3g0331 87 MobiDBLite consensus disorder prediction 14 38 - -
Vvi3g0331 87 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 61 IPR003676 GO:0009733
Vvi3g0331 87 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0331 Vvi-Chr3 2757523 2758810 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0331 - - vvi:100257334 95.1301