Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0326 ATGTTGGCTGACCAGGACCAAGATGACAAAATATACACTTCTGCTGCTGGTGTTGGTAATCATCAAGATGAAAAGGACATTGACATAGTTGCAACATACACTGACACTTCTGGTGTTGTCCGACTTGGTACTGTGAAAAGTAAGGACTTATCTGCTTCCTGGTACTGGGAAGATCCCATTAACGAAAGACAGGACCAGCTGAAAAGTTCCCAGAGGCTGGAAGATTCATCTCAAAGTAGAGTGAGACTTGGAGAGTTTGATAAGAGTTCTTTGGTTGAGCTTCGATCTAGAGATAGTGTAACGCAGAATCCTCAAATGTCTCCGTTGAACCCAGTGAAGCTTCAGCGCCGGGCATCACGACAAGAAAGGAAGGATCTCCGAACTGCGGAGTTACTCCGAGAAGATAAAGAAAATGATAGCCAAGTGCAAGCAGCAGCAATTGAACGCTCTAAAGAGCTTGACACCACTGCCAAGGGAAGGTACAGCATATGGAGGAGAGAACATGAAAACCCTAACTCCGATGATACCTTGAAACTTATGCGAGATCAGATAATAATGGCCAAAGCATATGCTAGCATCGCCAGGGCTAAGAACGAAACTTATCTTTATAAATCTCTCATAAATCATTTCAGAGAAAATCGACGTGCAATTGGAGAAGCAAACACTGATTCTGAGCTTCACTCGAGTGCACTTGCTCGAGCAAAAGCAATGGGTAATATCCTATCTAAAGCAAAGGACAAATTATATGACAGCATTAACGTAGCAAGGAAGTTAAGAGCCATGGTTCAGTCAACTGAAAATACTGTAGATGCACTGAAGAAACAGAGTGCATTCTTGATTCAGCTAGCCGCAAAAACTGTCCCTAAACCATTGAATTGCCTCCCTCTTGTGCTCACAACTGATTATTTTCTGCAAGGTCGTCAAAAGAGAGTGGTTCTTAACAAAAAATTGCTTGAAGATCCTTCTCTCTACCATTATGCTATCTTTTCTGATAATGTGCTTGCAACATCTGTAGTCATCAATTCTACAATGCTACATGCAAGTGAACCTGAGAAGCATGTTTTCCATATAGTCACTGATAAACTGAGTTTTGCAGCAATGAAAATGTGGTTTCTTGTCAACAGTCCTGCAAAAGTGACAATTCAAGTTGAGAACATTGATGATTTTAAGTGGCTCAATTCTTCTTACTGTTCTGTTCTACGCCAACTTGAGTCTGCTCGAATGAAAGAATATTATTTCAAAGCATCTCATCCATCTACTCTTTCTGATGGATTTGAGAATCTCAAATACAGGAATCCAAAATATCTGTCCATGCTGAATCATCTCAGGTTCTACCTTCCTGAAGTTTACCCGAAGCTGGAGAAGATCCTATTTTTGGACGATGATATTGTAGTGCAGAAAGATTTGACACCTCTTTGGTCCCTTGATATGCAAGGGATGGTGAATGCTGCAGTTGAGACCTGTAAGGAGAGCTTCCATAGGTTTGATAAATATCTGAACTTCTCTCACCCAAAGATCTCTGAGAATTTTGATCCAAATGCTTGTGGTTGGGCATTTGGCATGAACATGTTTGACTTGAAGGAGTGGAGGAAGCGAAACATGACTGGAATATATCATTATTGGCAAGACATGAATGAAGATAGAACTCTCTGGAAACTTGGATCGTTGCCACCGGGACTGATCACTTTCTACAACCTGACATATCCATTGGATCGTAGCTGGCATGTGTTGGGACTTGGCTATGACCCGCAACTTAACCAGACAGAGATAGACAATGCAGCCGTTGTCCATTACAATGGAAATTACAAACCATGGTTGGAGCTTGCAATCGCCAAGTACAAGTCGTATTGGTCAAGATACGTAATGCCCGATAATCCCTATCTTCAACTTTGCCATATCAGCCAATAG 1908 0.4156 MLADQDQDDKIYTSAAGVGNHQDEKDIDIVATYTDTSGVVRLGTVKSKDLSASWYWEDPINERQDQLKSSQRLEDSSQSRVRLGEFDKSSLVELRSRDSVTQNPQMSPLNPVKLQRRASRQERKDLRTAELLREDKENDSQVQAAAIERSKELDTTAKGRYSIWRREHENPNSDDTLKLMRDQIIMAKAYASIARAKNETYLYKSLINHFRENRRAIGEANTDSELHSSALARAKAMGNILSKAKDKLYDSINVARKLRAMVQSTENTVDALKKQSAFLIQLAAKTVPKPLNCLPLVLTTDYFLQGRQKRVVLNKKLLEDPSLYHYAIFSDNVLATSVVINSTMLHASEPEKHVFHIVTDKLSFAAMKMWFLVNSPAKVTIQVENIDDFKWLNSSYCSVLRQLESARMKEYYFKASHPSTLSDGFENLKYRNPKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSLDMQGMVNAAVETCKESFHRFDKYLNFSHPKISENFDPNACGWAFGMNMFDLKEWRKRNMTGIYHYWQDMNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLGYDPQLNQTEIDNAAVVHYNGNYKPWLELAIAKYKSYWSRYVMPDNPYLQLCHISQ* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0326 635 MobiDBLite consensus disorder prediction 94 123 - -
Vvi3g0326 635 Pfam Glycosyl transferase family 8 293 608 IPR002495 GO:0016757
Vvi3g0326 635 CDD GT8_like_1 324 621 - -
Vvi3g0326 635 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 326 625 IPR029044 -
Vvi3g0326 635 MobiDBLite consensus disorder prediction 95 114 - -
Vvi3g0326 635 Coils Coil 255 275 - -
Vvi3g0326 635 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 137 633 IPR029993 GO:0047262
Vvi3g0326 635 SUPERFAMILY Nucleotide-diphospho-sugar transferases 324 629 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0326 Vvi-Chr3 2732160 2736013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0326 2 635 Glycosyltransferase AT4G38270 66.614 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0326 K13648 - vvi:100246897 1276.15