Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0318 ATGAAGTTAACAGGGTTTCTCGATATCAACCCATTGGGCTCCTCAACGCCTACATGGGCGAGCCTAGTTGCTGGTGTCTTTGTGCTTATCTCTCTTTCCCTCTCAATGTACCTTCTATTTGAGCACCTTTCTTCATACAAGAATCCCGAGGAGCAAAAGTTTTTGATCGGAGTCATCTTAATGGTTCCTTGCTATGCAATTGAATCGTTTGTGTCATTGGTGAATCCATCAATCAGTGTTGATTGTGCAATACTACGTGACTGCTATGAAGCCTTTGCCATGTATTGCTTCGGGAGATACCTTGTTGCTTGCTTGGGTGGGGAAGAGAGGACTATTGAATTTATGGAGAGGCAAGGACGAGCAAGTTCTAAAACTCCCTTATTAGAGAACAATTGTGAAAAGGGAACAGTAAAGCATCCTTTCCCAATGAATTATTTCCTAAAACCATGGAAACTTGGTCAATGGTTTTACCAAGTCATCAAGATTGGCATTGTTCAATATATGATAATAAAGTCTTTGAGTGCTATTTTAGCTGTAATTCTTGAAGCCTTCAGCTTGTATTGTGAAGGCGACTTTAAATGGGGATGTGGGTATCCTTACATAGCAGTGGTTCTAAATTTCAGTCAATCATGGGCTCTGTACTGCTTAGTTCAGTTTTATACTGTTACAAAGGATGAATTGGAGCACATAAAACCATTGGCTAAGTTTCTAACATTTAAATCAATTGTGTTTTTAACATGGTGGCAAGGTGTGGCGATTGCTCTTCTTTATGACCTTGGTTTATTTAAGAGTGCTATTGCTCAAGGCTTACAGTCGAAATCCAGTGTCCAAGACTTCATCATTTGTATAGAGATGGGCATCGCTTCAATTGTTCACCTGTATGTATTCCCTGCCAAGCCTTATGAGCTAATGGGAGACCGGTTATCTGGAAGTGTTTCGGTTCTTGGAGACTATGCATCTACCGATCCTCTGGATCCTGATGAGGTTAGGGACAGTGAGCGGCCAACAAAACTACGCCTTCCCCACCCTGACATTGACATCAGGAGTGGAATGACTATCGGAGAAAGTGTTCGGGATGTTTTCATTGGTGGTGGTGGATATATTGTGAATGATGTGAAATTCACTGTAAACCAAGCAGTGGAGCCTGTGGAGAAGGGAATCACAAAGTTCAATCAGAAATTACATAAAATCTCTCAGAACATAAAGAGGCATGACAAGGAAAAGAGAAAAACAAAGGATGACAGTTGCATAACACCCACACGAAGAGTGATCCGTGGAATAGATGATCCCCTATTAAATGGGAGCTTTAGTGATAGTGGGGTCTCAAGGGGAAAGAAGCATCGTCGAAAATCAGGATATACCAGTGGAGAAAGTGGGGGAGAAAGCAGCAGTGATCAAAGTTATAGTGCATATCAGATCCGCGGTGGCAGATGGGTTACCAAAGATTAG 1449 0.4182 MKLTGFLDINPLGSSTPTWASLVAGVFVLISLSLSMYLLFEHLSSYKNPEEQKFLIGVILMVPCYAIESFVSLVNPSISVDCAILRDCYEAFAMYCFGRYLVACLGGEERTIEFMERQGRASSKTPLLENNCEKGTVKHPFPMNYFLKPWKLGQWFYQVIKIGIVQYMIIKSLSAILAVILEAFSLYCEGDFKWGCGYPYIAVVLNFSQSWALYCLVQFYTVTKDELEHIKPLAKFLTFKSIVFLTWWQGVAIALLYDLGLFKSAIAQGLQSKSSVQDFIICIEMGIASIVHLYVFPAKPYELMGDRLSGSVSVLGDYASTDPLDPDEVRDSERPTKLRLPHPDIDIRSGMTIGESVRDVFIGGGGYIVNDVKFTVNQAVEPVEKGITKFNQKLHKISQNIKRHDKEKRKTKDDSCITPTRRVIRGIDDPLLNGSFSDSGVSRGKKHRRKSGYTSGESGGESSSDQSYSAYQIRGGRWVTKD* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0318 482 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 16 437 IPR005178 -
Vvi3g0318 482 MobiDBLite consensus disorder prediction 435 482 - -
Vvi3g0318 482 Coils Coil 387 414 - -
Vvi3g0318 482 SMART Solute_trans_a_2 20 301 IPR005178 -
Vvi3g0318 482 MobiDBLite consensus disorder prediction 455 473 - -
Vvi3g0318 482 Pfam Organic solute transporter Ostalpha 21 301 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0318 Vvi-Chr3 2631520 2638651 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0318 - - vvi:100245301 950.658