Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0314 ATGGCTGAATGGGCCAATCTCCCCAGAGACCTTCTCCACCTGATCGCCAAACGCCTCGACTCCCACTTCGATCTCCTCCGATTTCGATCCGTTTGCTCCTCATGGCGCTCTTCTACACCCTCCAAGCCTCGCTCCATCTTCAGCCACTTGCCCATCTTACCCACAACCGGATTCTCCGAAATCACCTGGGCTTTCTATCTATCCAAGCGCTCAATTCTCCAGCTCGGATTACCAGACTCTCGTGCCCAAACAACCCCCAATTCCTGGCTCATCAAGATCGAAGAAGACCCATCTGGTGTGATCCGCTTGATAAACCCCCTCACCACTTTCAAATTCAGGCACCTCCCGCCCGATTTCCCAAAAACGTTTGATTTTTCGGGGTTACGTGTCTTCGAATTAGGCCAGGAATATGTTCTTGAGTATATGGATTATCGCCCACCTGGAAATGCTTATCTGGGGAGTTTGTATATGGAGAAGGTTGCGTTCTGTTCTGGTAATGGTGATGATTTTTGGTTGCTGACAATTCATTTGTCTGGGAAATTAGCTATGTTTAGGAGTGGAGACAAGAAGTGGATGATAATTGATGATATGCAGTCGCCTTATGATGATGTTATCTTCTTTGATGGGAAGTTCTACGCTGTTGATAACACTGGGCGGACTGTGGTTGTGGATGTGGCGGATGGGTCATCGCCGGTAGTGAATTTGGCGGCGAGTTCGGTGTTTGGCGGTGACAAGAAAGTGTTTGGTTGA 750 0.4867 MAEWANLPRDLLHLIAKRLDSHFDLLRFRSVCSSWRSSTPSKPRSIFSHLPILPTTGFSEITWAFYLSKRSILQLGLPDSRAQTTPNSWLIKIEEDPSGVIRLINPLTTFKFRHLPPDFPKTFDFSGLRVFELGQEYVLEYMDYRPPGNAYLGSLYMEKVAFCSGNGDDFWLLTIHLSGKLAMFRSGDKKWMIIDDMQSPYDDVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNLAASSVFGGDKKVFG* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0314 249 Gene3D - 3 45 - -
Vvi3g0314 249 PANTHER F-BOX PROTEIN SKIP23 1 242 - -
Vvi3g0314 249 SMART fbox_2 7 48 IPR001810 GO:0005515
Vvi3g0314 249 SUPERFAMILY F-box domain 4 38 IPR036047 GO:0005515
Vvi3g0314 249 Pfam F-box domain 4 37 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0314 Vvi-Chr3 2611323 2612072 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0314 - - vvi:100255655 509.605