Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0304 ATGGGAGAGGTGATGGTGGAAGAGTATCCATTTGTCCATGTGGTTACCACCGTGCCCAGCCCCATTCAGGAGGTGGTGCCAAAACCACAGGAGGATTGGCTCCCGGTCTCCGACTCCAGGAAGGAGGTGCCAAGCCCACAAGAAGGATGGCTCCCTATCACCGAGTCCAGAAAGGGCGGCGCCTTTACCTCTGCATTTCATTTGCTGGCCTCAGGGATAGGGATTCAGGCTTTTTTGCTTCCCGTAGCTTTTTCTAAGTTGGGATGGTTCTGGGGAATAGCATGTTTGTTGTTGGCATTTGCGTGGCAGCTCTACACCAAGTGGCTTCTTGTGCAGCTTCATGAACCAGGTCCTGGAACCCGGTACAGCAGATACCTTCATCTCTCAGTTGTGGCCTTTGGTCCAAAGCTGGGGAAGTTGCTTGCTCTGTTCCCAGTGATGTATCTCTCTGGGGGTACCTGTGTGATGCTGATCAACTATGGGGGCGGTAGCATGGAGCTTCTCTTCAGAACTGTGTGTGGGGATTCTTCATGCATTGCCAATAAACTAACTGGGGCCGAGTGGTTCATGGTGTTCACTTGCTTGGCAATCATCGTGGCTCAGCTCCCCAACTTGAACTCGATGGCTGGTGTCTCACTCCTCGGCGCAGCCACTGCCATCAGTTACTGTACTTTCCTTTGGATTCTATCCATCACCAAGGGCAGGCCAGCTGGTGTGTCATACAGCCCACCAGAGGCAGAATCAAGGATGGCAAGAATTGGGGAAGTCTTGACTGCAATTGGGATGATTGCTCTTGCATTTAGAGGTCACAATGTTGTCCTTGAGATACAGGGGACAATGCCTTCAAATCCAAAACATCCATCACAAGAGCCAATGTGGAGAGGAGTGATTGTTTCATGTTCCATAACCGCTGCATGTTTGTTTCCACTGGCAATAGCCGGATACTGGGCTTATGGAAACAGGATACCTGCAAATGGAGGGTTGTTAAGTGCATTTTCAGAGTTCCATGGACAAAACACCAAAAAGCTAGTGATGAGGATGATATACCTGCTGATAGTGGTGAACAGCTTGTGTTCATACCAAATCTATGCCATGCCAGTTTTCGACAACTTGGAGTTCAGGTACATCAGCAAGAAGAATAAGCCATGCTCACGTTGGGTCCGTGCAGCAATCAGGGTGTTCTTTGGTGGACTGACAACTTTCATAGCAGTAGCAGTTTCATTCTTGGGAAGCTTAGGTCCTCTAATTGGAGGGATCGCATTGCCTCTGACACTTGCTTATCCATGTTTCATGTGGATCGCCATCAAGAAACCCCGTCAGTATGGTGCCATGTGGTATCTCAATTTGGGACTTGGCTGTTCAGGCATTATACTCAGTGTCCTGTTAGTTGCTGCAGCAGTATGGAAGATAGTGGACAAAGGCATAGATGCCAGTTTCTTCAACACTCACTTATCACCTCTATTGAAGCCCCCACAGTCATAA 1482 0.4899 MGEVMVEEYPFVHVVTTVPSPIQEVVPKPQEDWLPVSDSRKEVPSPQEGWLPITESRKGGAFTSAFHLLASGIGIQAFLLPVAFSKLGWFWGIACLLLAFAWQLYTKWLLVQLHEPGPGTRYSRYLHLSVVAFGPKLGKLLALFPVMYLSGGTCVMLINYGGGSMELLFRTVCGDSSCIANKLTGAEWFMVFTCLAIIVAQLPNLNSMAGVSLLGAATAISYCTFLWILSITKGRPAGVSYSPPEAESRMARIGEVLTAIGMIALAFRGHNVVLEIQGTMPSNPKHPSQEPMWRGVIVSCSITAACLFPLAIAGYWAYGNRIPANGGLLSAFSEFHGQNTKKLVMRMIYLLIVVNSLCSYQIYAMPVFDNLEFRYISKKNKPCSRWVRAAIRVFFGGLTTFIAVAVSFLGSLGPLIGGIALPLTLAYPCFMWIAIKKPRQYGAMWYLNLGLGCSGIILSVLLVAAAVWKIVDKGIDASFFNTHLSPLLKPPQS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0304 493 PANTHER OS05G0424000 PROTEIN-RELATED 61 471 - -
Vvi3g0304 493 Pfam Transmembrane amino acid transporter protein 58 470 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0304 Vvi-Chr3 2563386 2565520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0304 45 492 Organic Solute Cotransporters AT1G47670 52.009 3.23e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0304 - - vvi:100241879 989.949