Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0303 ATGAACATGGGTGATCACAGTGAAGTTAGCTCTGCTCCAATTACTCCTAGGCCGATGACACCAAGGCAAGGGACACCGCCTATATCGGCTCCAATTACCCCTAGGCCAATGACACCAAGGCTAATGACACCGCCCATATCGGCTCCTCCGTCGCAGTTCCACTCTCCTTCCCTCTCCCGGTCACCGCTGCTAATTTCCATCGGAGGAGACCAAGTGGAACCTGCAGGCAAAACACCCAAAACATCCAAAACATCAACACCCAGAACATCCAGGACTCCGAATTTTAGGACTCCTATAATCAGAACCCCTCGCTTCATTACTCCCTTGGGGAGCCCCATTAGGAAGGCGTTGCGCTTCACTAAGCTCGACCCTCAAGATGCTTGGCTGCCCATCACTGAGTCAAGAAATGGAAATATATACTATGCTGCCTTCCACACCCTCTCTTCTGGGATAATTGGAATTCAAGCCCTAGTCCTCCCTGTGGCCTTCACTGTTCTTGGGTGGACATGGGGGACCATATGCTTGACAGCAGCATTCATATGGCAACTCTACACTCTATACTTACTTGTCCATCTCCATGAATCCCCCGAAACCGGCATGCGATTCAGCCGATACCTTCAGCTCTTCAATGCAACTTTTGGTGAAAAGATGGGGAATATTTTTGCGATATTTCCGATAATGTATCTATCAGGAGGAACATGCGTTGCCCTAATCATCATGGGAGGCTCAACAATGAAGCAGTTCTACCTGACAGTCTGCGGTGGCGCCGCCTGCTCGCCGAACCCACCAACAACTGCAGAGTGGTACTTGATATTCACATGTGCTGCAGTTGTGCTGTCCCAGCTGCCCAACTTGAACTCCATCGCCGGTGTTTCGCTGATCGGCGCTATCACTGCAGTGACCTATTGTACCATGATATGGGTAGTGTCTGTGGCTGAGGGGAGGGTGTCTGGGGTTTCATACAATCCAGTTTCGTCCAGCTCAGAAATTGGTAGAATTTTTGATGTTTTGAATGCACTTGGGATCATTGCTTTTGCCTTCAGAGGCCACAACCTCATCCTTGAGATTCAGGCCACAATGCCATCTGATGAGAAGCATCCATCACATGTGCCAATGTGGAAGGGTGTCAAGGTTTCATATACGATAATTGCATTGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGATACCGAGCGATGGGGGCGTGCTAGCAGCATTGTTTCAATACCATGGCCATGACACATCTCAAGTCATCTTAGGACTAACAAGCTTATTCGTCATAATTAACGCGGTAAGCGCTTTCCAAATCTACGGCATGCCAACATTCGACGACATCGAGTCCAAGTACACCATGAGAAAGAAGAAGCCATGTCCAAAGTGGCTCAGGGCACTTATCCGGGCCTTGTTTGGATTTGGGTGCTACTTAATGGCCGTGGCCTTACCATTCGTGAGCAAGCTGACTGGACTTCTTGGTGGCTTCGCCCTACCAATCACATTAGCCTATCCATGCTTCCTGTGGCTCAAGACCAAGAAACCAAAAATGTATAGCCCAAGTTGGTTGATTAATTGGGGATTAGGGACATCAGGGATGGGGCTAAGCGTAATAGTAATCGTGGCCAGTATATATGTTCTGATTGATACTGGGATTCACGTTAGCTTCTTTAATCCTTAG 1689 0.4849 MNMGDHSEVSSAPITPRPMTPRQGTPPISAPITPRPMTPRLMTPPISAPPSQFHSPSLSRSPLLISIGGDQVEPAGKTPKTSKTSTPRTSRTPNFRTPIIRTPRFITPLGSPIRKALRFTKLDPQDAWLPITESRNGNIYYAAFHTLSSGIIGIQALVLPVAFTVLGWTWGTICLTAAFIWQLYTLYLLVHLHESPETGMRFSRYLQLFNATFGEKMGNIFAIFPIMYLSGGTCVALIIMGGSTMKQFYLTVCGGAACSPNPPTTAEWYLIFTCAAVVLSQLPNLNSIAGVSLIGAITAVTYCTMIWVVSVAEGRVSGVSYNPVSSSSEIGRIFDVLNALGIIAFAFRGHNLILEIQATMPSDEKHPSHVPMWKGVKVSYTIIALCLYPLTIGGYWTYGQLIPSDGGVLAALFQYHGHDTSQVILGLTSLFVIINAVSAFQIYGMPTFDDIESKYTMRKKKPCPKWLRALIRALFGFGCYLMAVALPFVSKLTGLLGGFALPITLAYPCFLWLKTKKPKMYSPSWLINWGLGTSGMGLSVIVIVASIYVLIDTGIHVSFFNP* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0303 562 MobiDBLite consensus disorder prediction 1 18 - -
Vvi3g0303 562 PANTHER OS05G0424000 PROTEIN-RELATED 139 546 - -
Vvi3g0303 562 Pfam Transmembrane amino acid transporter protein 143 551 IPR013057 -
Vvi3g0303 562 MobiDBLite consensus disorder prediction 19 51 - -
Vvi3g0303 562 MobiDBLite consensus disorder prediction 77 96 - -
Vvi3g0303 562 MobiDBLite consensus disorder prediction 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0303 Vvi-Chr3 2545483 2548797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0303 19 562 Organic Solute Cotransporters AT1G47670 51.351 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0303 - - vvi:100248706 1096.65