Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0287 ATGGCTGCCTCTCCTTTAAACCCCAGAGCCCAGTATCAAGCTCGCTCTATTAGCTTGTCCTCTAGACCACACCCTCTTGTTCCTGAATTTGATGAGCATTTATGCAGATTAAGAGCTTCTCAAGCTGCCTCGTCCTCATCATCATCAATAAGCCACAGACTGAGTGGGCTTAAAGATCTACATGATTGTGTAGATGATTTACTTCTGTTGCCACTTACTCAACAGGCCTTAGCCCAACACCGCCATGAGAAATGGGTTGATGAGCTGTTGGATGGATCTCTCAAGCTGTTGGATGTGTGTGGCACTGCTAAGGATGCCTTGCTGCAGACAAGGGAACATGCACATGAACTTCAATCAAGTCTGCGAAGAAGGCGGGGAGGCGAAAATGGGATCTCAACTGAGGTTGGAGAATATTTAACCTCTAGGAAGAAGGTAAAGAAGGCAATCCACAAGGCCCTAAGTAATCTGAAGAGCATGGAGAAGAAGTGCAGCTTCTCTCCCTTGAACAAAGACCCTAAGACTCTCTCCATGGTTTACATGTTAAGGGAGGTGGAAGCACTCACTCTCACAGTGCTTGAATCTCTGTTGTCCTCAATTGCAAGAGCAACAGGACAATCCAAGCCAAGTGGGTGGTCTTTGGTTTCAAAGCTGATGCATCATAAGCGTGTGGCATGTGAAGACGCAGCAATAAATCTTACTGAATTTGAGAAAATGGATGCGGCATTATCCATCCTCATTGGCCTCAAGACCAAATCTGTTAACCTGGTGCAGATTCATAATATGCAAAATGAGTTGGGAAAATTGGAATCAAGCATTCAAGACCTTGAAGAAGGGATAGAACTCCTGTCCAGGTGTTTAATCAAAACCAGGGTCTCTCTTCTCAACACCCTCAGCCACTAG 900 0.4544 MAASPLNPRAQYQARSISLSSRPHPLVPEFDEHLCRLRASQAASSSSSSISHRLSGLKDLHDCVDDLLLLPLTQQALAQHRHEKWVDELLDGSLKLLDVCGTAKDALLQTREHAHELQSSLRRRRGGENGISTEVGEYLTSRKKVKKAIHKALSNLKSMEKKCSFSPLNKDPKTLSMVYMLREVEALTLTVLESLLSSIARATGQSKPSGWSLVSKLMHHKRVACEDAAINLTEFEKMDAALSILIGLKTKSVNLVQIHNMQNELGKLESSIQDLEEGIELLSRCLIKTRVSLLNTLSH* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0287 299 Coils Coil 258 278 - -
Vvi3g0287 299 PANTHER OS06G0725500 PROTEIN 10 297 - -
Vvi3g0287 299 Coils Coil 142 162 - -
Vvi3g0287 299 Pfam Protein BPS1 54 295 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0287 Vvi-Chr3 2458653 2459552 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0287 - - vvi:100252108 521.546