Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0286 ATGGCTGCCTCTCCTTTAAACCTGAAAACCCCTTGTCATGCTCGCTCTATTAGCTTGCCCTCTGCACCACACCCTCTCATTCCTGAGTTCAATGCACACTTGAGAAGATTAGGAGCTTCTGAACCCGCCTCATCATCAATAAGCCATAAGCTCAATGGCCTTAAAGATCTACATGATTGTGTAGATAATTTGCTTCTATTGCCACTCACCCAAAAAACATTAGCCCAACACTATGATGAGAAATGGGTTGATGAGTTGTTGGATGGATCTCTGAGGCTGTTGGATGTGTGTGGCACTGCTAAAGATGCCTTGTTGCAGACAAAGGAACATGCACATGAACTTCAATCAAGTATGCGCAGAAGGCGAGGAGGTGAAAGTGGGATCTCATCTGAGGTTGTGGGATATTTAACCTCTAGGAAGAAGGTAAAGAAGGCAATCCACAAGGCCCTAAAGGATCTGAAGGGCATGGAGAAAAAGTGCAGCTTCTCACCCTTGAACAAAGACCCTGAGACCATCTCCATGGTTAGCATGTTAAGAGGGGTGGAAACTGTCACTCTCAAAGTGCTTGAATCTCTGTTGTCCTCAATAGCAGGGGAAACAGCACAGTCAAATCCAAGTGGCTGGTCCTTGGTTTCAAACCTGATGCGGCACAAGCACATTGCATGTGAAGAAGCAACAACAATAGATCTTGGTGAATTTGAGAAGGTGGATTCTGCATTGTTCACCCTTACTGTCCACAAGACTAAATCCAACCCAATGCACATTGATATTGTGCAAACTGAGTTAGGGAAATTGGAAATAAGCATTCAAGATCTTGAAGAAGGATTAGAATTCCTATACAGGCGTTCAATCAAGACCAGGGTGTCTTTTCTCAACATCCTCAGCCAGTAG 891 0.4444 MAASPLNLKTPCHARSISLPSAPHPLIPEFNAHLRRLGASEPASSSISHKLNGLKDLHDCVDNLLLLPLTQKTLAQHYDEKWVDELLDGSLRLLDVCGTAKDALLQTKEHAHELQSSMRRRRGGESGISSEVVGYLTSRKKVKKAIHKALKDLKGMEKKCSFSPLNKDPETISMVSMLRGVETVTLKVLESLLSSIAGETAQSNPSGWSLVSNLMRHKHIACEEATTIDLGEFEKVDSALFTLTVHKTKSNPMHIDIVQTELGKLEISIQDLEEGLEFLYRRSIKTRVSFLNILSQ* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0286 296 Coils Coil 139 159 - -
Vvi3g0286 296 PANTHER OS06G0725500 PROTEIN 10 294 - -
Vvi3g0286 296 Coils Coil 255 282 - -
Vvi3g0286 296 Pfam Protein BPS1 50 293 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0286 Vvi-Chr3 2456221 2457111 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0286 - - vvi:100260729 559.296