Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0285 ATGGCATTCTCTCCTTTAAACACAAAATCCCAGTATCATGTTCGGTCAATCAGCTTGCCCTCTAGGCCACACCCTCTCATTCCTGAATTTGATGAGCATTTGTGCAGATTAAAAGTTCCTGAATCCACCTGTTCATCATCATCAATAAGCCACAAACTGAGCGGCCTTAAAGATGTACATGATTGTGTAGATGATTTGCTTCTGTTGCCACTTACTCAACAGGCCTTAGCCCAAAACTGCCTTGAGAAATGGGTTGATGAGCTGTTAGAAGGATCTCTCAAGCTGTTGGATGTGTGTGGCACTGCCAAGGATGCCTTGTTGCAGACCAGACAACATGCATATGAACTTCAATCAAGCATTCGCAGAAGGCGGGGAGGTAAAAATGGGATCTCAACTGAGGTTGAGGAATATTTAACCTCTAGGAAGAAGGTAGTGAAGGCAATTCACAAGGCCCTAAAGACTCTAAAGGGCATGGAGAACAAGTGCAGCTTCTCACCCTTGAACAAAGACCCTGAAACCATATCCATGGTTAGCATGTTAAGAGAGGTGGAAACAGTCACTGTCACAGTGCTTGAATCTCTGTTATCCTCAATAGCTGGGGCAACAGCACGATCAAAACCAAGTGGCTGGTCTTTGGTCTCAACACTGATGCACCAGAAGCGTGTCGCATTTGAGGATGCAGCAGTAGATCTTAGTGAATTTGAGAAGGTGGATGCTGCATTGTACCCCCTCATTGGCCACAAGGGTAGATCAGTTAATCTAGTGCATGTTGATAGAGTGCGGAATGAGTTAGAAAAATTGGAATCAAGCATTCAAGATCTTGAAGAAGGGATAGAGTTCCTCCCCAGGCGCTTAATCAAAACCAGGGTGTCTCTGCTGAACATCCTCAGCCACTAG 897 0.4515 MAFSPLNTKSQYHVRSISLPSRPHPLIPEFDEHLCRLKVPESTCSSSSISHKLSGLKDVHDCVDDLLLLPLTQQALAQNCLEKWVDELLEGSLKLLDVCGTAKDALLQTRQHAYELQSSIRRRRGGKNGISTEVEEYLTSRKKVVKAIHKALKTLKGMENKCSFSPLNKDPETISMVSMLREVETVTVTVLESLLSSIAGATARSKPSGWSLVSTLMHQKRVAFEDAAVDLSEFEKVDAALYPLIGHKGRSVNLVHVDRVRNELEKLESSIQDLEEGIEFLPRRLIKTRVSLLNILSH* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0285 298 Coils Coil 257 284 - -
Vvi3g0285 298 PANTHER OS06G0725500 PROTEIN 9 296 - -
Vvi3g0285 298 Pfam Protein BPS1 52 295 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0285 Vvi-Chr3 2454189 2455085 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0285 - - vvi:100257230 527.324