Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0282 ATGGCTGTATCTCCTTTAAACACAAAAGCCTGTTATCATGCTCGCTCTATCAGCTTGCCCTCTAGACCACACCCTCTCATTCCTGAATTTGATGAGCATTTGCGCAGATTAAGAGCTTCTGAAGCCACCTCTTCATCATCCATAAGCCACAAACTTAGTGGCCTTAGAGATCTACACGATTGTGTTGATGATTTGCTTCTGATGCCACTCACTCAACAAATCTTAGCTCAATACCGCCATGAGCAATGGGTTGATGAGCTGTTGGATGGATCTCTCAGGCTTCTAGACATATGCAGCACAGCTAAGGATGCCTTGTTGCAGACAAGGGAAGGTGCTCAGGAGCTTCAATCAAGAATGCGCAGAAGGCGAGGAAGTGAAAATGGGATCTCAAATGAGATTGAGAAATATTTAAGCTCTAGGAAGAAGGTAAAGAAGGCAATCCACAAGGCCCTAAGGAATCTGACGGGCATGGAGAAGGAGTGCAGATTCTCTACCTTGAACAAAGACACTGAGACTCTCTCCATGGTCAGCATGTTAAGAGAGGTGGAAACAATCACCCTCACAGTGCTTGGAGCTCTGCTGTCCTCAGTAGCTGGGGCTGCAGCACAATCAAAGCGAAGTGGCTGGTCTTTAGTCTCAAAATTGATGCAACACAAGCGTGTGGCATGTGAGGAAGCAGAATCCGATCATGGTGAATTTGAGATGGTGGATGCTGCATTGTGCACTATCCTTTGCAACAAGAATAAATCAGTTAATCTTGTACATGCTGATGATGTGCATAATGAGTTAGGGAAACTGGAATTGAGCATTCATGATCTTGAAGAAGAGATAGAATTACTATCAAGACGATTAATCAAAACCAGGGTGTCTCTCCTCAACATCCTCAGCCAATAG 894 0.4463 MAVSPLNTKACYHARSISLPSRPHPLIPEFDEHLRRLRASEATSSSSISHKLSGLRDLHDCVDDLLLMPLTQQILAQYRHEQWVDELLDGSLRLLDICSTAKDALLQTREGAQELQSRMRRRRGSENGISNEIEKYLSSRKKVKKAIHKALRNLTGMEKECRFSTLNKDTETLSMVSMLREVETITLTVLGALLSSVAGAAAQSKRSGWSLVSKLMQHKRVACEEAESDHGEFEMVDAALCTILCNKNKSVNLVHADDVHNELGKLELSIHDLEEEIELLSRRLIKTRVSLLNILSQ* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0282 297 PANTHER OS06G0725500 PROTEIN 10 295 - -
Vvi3g0282 297 Coils Coil 256 290 - -
Vvi3g0282 297 Coils Coil 140 160 - -
Vvi3g0282 297 Pfam Protein BPS1 51 294 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0282 Vvi-Chr3 2438799 2439692 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0282 - - vvi:100245194 548.51