Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0280 ATGGCTCTCTTTCCTTCAAACCCAAAAGCCTCCTATCATGCTCGCTCTATTAGCTTGCCCTCTAGACCACACCCTCTCATTCCTGAATTTGATGAGCTTTTGTGCAGAGTAAGAGCCTCTGAAGCCACCTCTTCATCATCATCAATAAGCCACAAACTTAGTGGCCTTAGAGATGTACATGATTGTGTGGATGATTTGCTTCTGCTCCCATTCACTCAACAAACCTTAGCTCAAAACCGCCATGAGAAATGGGTTGATGAGCTGTTGGATGGATCTCTCAGGCTTCTGGACATATGTGGCGCTGCTAAGGATTCCTTGCTGCAGACAAGGGAAGGTGCACACGAACTTCAATCTAGTATGCGCAGAAGGTGTAGAACTGAAAATGGGATCTCCAGTGAGATTGGGAACTATTTAACTTCTAGGAAGAAGGTAAAGAAGACAATCCACAAGTGCCTAAGGAATCTGAAGGGCATGAAGAGCAAGTGCGGATTCTTTGCCTCGAACAAAGACACTGAGACTCTCTCCATGGTCAGCATGTTAAGAGAGGTGGAAACAGTCACTCTCACAGTGCTTGAAGCTCTATTGTCCTTAATAGCTGGGCCAACAGCAGGATCAAAGACAAGTGGCTGGTCGTTAGTCTCAAAATTGAAGCAACACAAGCGCGTGGCATGTGAGGAAGCAGAAGCCGAAATTAGTGAATTTGAGAAGGTGGATGCTGCATTGTGCACCATTCTTGCCAACAAGAACAAATCAGTTAATGTAGTGCATGCTGATAATGTGCATAATGAGGTAGCAAAACTAGAATCAAGCATTCAAGATCTTGAAGAAGGGATAGAGTTCCTATCAAGGCGTTTAATCAAAACCAGGGTGTCTCTCCTCAACATCCTCAGCCATTAG 897 0.4482 MALFPSNPKASYHARSISLPSRPHPLIPEFDELLCRVRASEATSSSSSISHKLSGLRDVHDCVDDLLLLPFTQQTLAQNRHEKWVDELLDGSLRLLDICGAAKDSLLQTREGAHELQSSMRRRCRTENGISSEIGNYLTSRKKVKKTIHKCLRNLKGMKSKCGFFASNKDTETLSMVSMLREVETVTLTVLEALLSLIAGPTAGSKTSGWSLVSKLKQHKRVACEEAEAEISEFEKVDAALCTILANKNKSVNVVHADNVHNEVAKLESSIQDLEEGIEFLSRRLIKTRVSLLNILSH* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0280 298 Pfam Protein BPS1 52 295 IPR004320 GO:0048364|GO:0048367
Vvi3g0280 298 Coils Coil 257 284 - -
Vvi3g0280 298 PANTHER OS06G0725500 PROTEIN 9 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0280 Vvi-Chr3 2434389 2435285 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0280 - - vvi:100250318 543.502