Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0278 ATGGCTGTCTCTCCTTTAAACACAAAAGCCTATTATCATGCTCGCTCTATCAGCTTGCCCTCTAGACCACACCCTCTCATTCCTGAATTTGATGAGCATCTGTGCAGATTAAGAGCTTCTGAAGCCACCTCTTCATCATCAATAAGCCACAAATTTAGTGGCCTTAAAGATCTACATGATTGTGTAGATAATTTGCTTCTGCTGCCATTCACTCAACAATCCTTAGCTCAATACCACCATGAGCAATGGATTGATGAGCTATTGGATGGATCTCTCAGGCTTTTGGACTTATGTGACACTGCTAAGGATGCCTTGTTGCAGACAAGGGAAGGTGCAAATGAACTTCAATCAAGTATGCGCAGAAGGCGAGGAAGTGAAAATGGGATCTCAAGTGAGATTGGGAAATATTTAACTTCTAGGAAGAAGGTAAAGAAGGCAATCCACAAGGCCTTAAGGAATCTGAAGGGCATGGGGAACAAGTGCAGCTTCTCTGCCTTGAATAGAGATCCTGAGACCCTCTCCACAGTCAGGATGTTAAGAGAGGTGGAAACAGTCACTCTCACAGTGATTGAAGCTCTGTTGTCCTCAATAGCTGGGTTAACAGCACAATCAAAGCGAAGTAGCTGGTCTTTAGTCTCAAAATTGATGCAACACAAGCGAGTGGCATGCGAGGAAGCAGAAGCTGATCTTAGTGAGTTTGAGAAGGTGGATACTGCATTGTGCACCCTCCTTGGCCACAAGAACAAATCAGTTAATGTAATGCATGTTGATAATGTGCATAATGAGGTAGCAAAGCTGGAATTGAGCATTCAAGATCTTGAAGAAGGGATAGAGTTCCTATCAAGGCATTTAATCAAAACCAGGGTGTCTCTCCTCAACATCCTCAGCCACTAG 894 0.4362 MAVSPLNTKAYYHARSISLPSRPHPLIPEFDEHLCRLRASEATSSSSISHKFSGLKDLHDCVDNLLLLPFTQQSLAQYHHEQWIDELLDGSLRLLDLCDTAKDALLQTREGANELQSSMRRRRGSENGISSEIGKYLTSRKKVKKAIHKALRNLKGMGNKCSFSALNRDPETLSTVRMLREVETVTLTVIEALLSSIAGLTAQSKRSSWSLVSKLMQHKRVACEEAEADLSEFEKVDTALCTLLGHKNKSVNVMHVDNVHNEVAKLELSIQDLEEGIEFLSRHLIKTRVSLLNILSH* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0278 297 Coils Coil 256 283 - -
Vvi3g0278 297 Pfam Protein BPS1 51 294 IPR004320 GO:0048364|GO:0048367
Vvi3g0278 297 PANTHER OS06G0725500 PROTEIN 10 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0278 Vvi-Chr3 2429670 2430563 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0278 - - vvi:100255496 568.54