Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0277 ATGTTAAGAGAGGTGGAAACAATCACTTTCACAGTGCTTGAATCTCTGCTGTCATCAATAGATGGGGTAACAGCACAATCAAAGCGAAGTGGCTGGTCTTTAGTCTCAAAATTGATGCAACACAAGCACGTGGCATGCGAGGAAGCAGAAGCCAATCTTAGTGAATTTGAGAAGGTGGATGCTGCATTGTGCACCCTTCTTGGCCACAAGAACAAATCAGTTAATGTGGTGCATGTTGATAATGTGCATAATGAGGTAGCAAAGCTGGAATCAAGCATTCAAGATCTTGAAGAAGGGATAGAGTTCCTTTCAAGGCGTTTAATCAAAACCAGGGTGTCTCTCCTCAACATCCTGAGCCAATAG 363 0.4325 MLREVETITFTVLESLLSSIDGVTAQSKRSGWSLVSKLMQHKHVACEEAEANLSEFEKVDAALCTLLGHKNKSVNVVHVDNVHNEVAKLESSIQDLEEGIEFLSRRLIKTRVSLLNILSQ* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0277 120 PANTHER OS06G0725500 PROTEIN 1 118 - -
Vvi3g0277 120 Coils Coil 79 106 - -
Vvi3g0277 120 Pfam Protein BPS1 1 117 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0277 Vvi-Chr3 2426905 2427267 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0277 - - vvi:104878766 216.083