Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0276 ATGGCTGTCACTCCTCTAAACCCAAAAGCCAATTACCATGCTCGCTCCATTAGCTTGCCCTCTAGGCCACACCCTCTCATTCCTGAATTTGATGAGCAGTTATGCAGATTACAAGCTTCTGAGGCCACCTCATCATCGTCAATAAGCCACAAACTTAGTGGCCTAAAAGATCTACATGATTGTGTAGACAATTTGCTTCTATTACCACTCACCCAACAGATCTTAGCCCAACACGGGCACAAGATATGGGTCGATGAGCTGATGGAGGGATCTCTCAGCCTATTAGATGCATGTGGCACTGCTAAGGAAGCACTGTTGCAGACAAAGGAACATACAAATGAACTTCAATCAACTCTACGCAGAAGGCGAAGAGGTGAATATAGGATCTCAACCAAGGTTGAGGAATATTTAACCTCTAGGAAGAAGGTGATGAAGGCAATCCACAAGGCCCTAAACAATCTGAAGGGCATGAAGAACAAGTGCAGTTTCTCTCCCTTGAACACAGACTCTGAGGCTCTCTCCATGGTCAGCATGTTAAGAGAGGTGGAAATGGTGACTCTCACAGTGCTTGAATCTTTGTTATCCTCAATATCTGGATCAACTGTGAGATCAAAGTCAAGCAGCTGGTCTTTAGTTTCAAAACTGATCCACCACAAGCAGGTAGCGTGTGAGGAAGCACCAGCAGGCCTCACTGATTTTGAGAAGGTGGATTCTGCATTGAACACCCTCATTGATCACAAGGGCAAATCAGTTAACCCAGTTCATGTTGATAATGTGCAAAATAAATTAGGGAAATTGGAGTCGAGCATTCAAGATCTTGAAGAAGGTCTAGAGTTCCTATCCAGGAGGTTGATCAAAACCAGGGTTTCTCTCCTCAATATCCTCAATCACTAG 894 0.4441 MAVTPLNPKANYHARSISLPSRPHPLIPEFDEQLCRLQASEATSSSSISHKLSGLKDLHDCVDNLLLLPLTQQILAQHGHKIWVDELMEGSLSLLDACGTAKEALLQTKEHTNELQSTLRRRRRGEYRISTKVEEYLTSRKKVMKAIHKALNNLKGMKNKCSFSPLNTDSEALSMVSMLREVEMVTLTVLESLLSSISGSTVRSKSSSWSLVSKLIHHKQVACEEAPAGLTDFEKVDSALNTLIDHKGKSVNPVHVDNVQNKLGKLESSIQDLEEGLEFLSRRLIKTRVSLLNILNH* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0276 297 PANTHER OS06G0725500 PROTEIN 9 295 - -
Vvi3g0276 297 Coils Coil 256 283 - -
Vvi3g0276 297 Pfam Protein BPS1 51 294 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0276 Vvi-Chr3 2421825 2422718 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0276 - - vvi:109122298 530.02