Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0274 ATGGGGTGTACGACTTCTAAGATTGATGATCTCCCGGCGGTGGCGCTTTGCCGAGAGAGATGTGCTTGCTTGGATGACGCGATACAGCAAAGGTACACTTTTGCGGCGTATCATGTGGCGTATATGAAGAGCTTGCAGGTGATTGGAGGGTCATTGCAGGAATTTTTTGACCTGGATCTTGATGGGTCAGCAGTGTCGCCGGTGCTGCCGCTGCCGGTTCAGAAAAAAGGAGATCATGAGGTTCAGAGGGAAATCAAACTCAAGGCTGAGCCCTCGGGCTTGTCGCCGGCGGCGGCTGCGTTGAACGACCGTTCGAATTCGAATTCCGGGTCGCATCTAAACTTTCACTCGGATTCGGACGACGAAGATGGTAGCATGGAATCCCTCCACCATTCCGAACACTATTCGCCTCGTCATGGCTATCAGGACCATCTCGGTTACGATGAGGAAGCCCTAAGTTCATTTCCGAGAGGGTTCATGAATGTGAACATGAATTTCATGAAAAATCAGGCCACACAGTCGGTGACGTACCAGCACCGGCCGGCGAGTCCTGAAAAGATGCACATGGGCGAAGCTTCGTACTACCCATATGCCTATCCGAACAATAATCCTAGTTCTTACCCCTACGGTTATGGTGGTGGAAATTACGGCTACTATGGCCAGCAGCCGCAGCAGCCGTATGGGGCTTCATCGCCCGCTATGGCAACGGGGGCGTCATCTTCGAAACCGCCTCCACCACCGCCATCACCGCCTAGCAGCTCGGCTTGGGACTTCTTTAACCCTTTCGAGAGTTATGATAAATACTATCCTCCATATACCCCTAGTAGAGACTCGAAAGATTTGAGAGAGGAGGAGGGTATTCCTGATTTGGAAGATGAGGATTATCTGCATGAAGTTGTGAAGGAAATTCACGGAAATCAGAAGTTTGTGGATGGCGGTGGAGGTGGTGGCAATTACGCAAAGATGATGGAGAATCAGAGCGAGAAGGTGGATAATATGGATGCCCATTATCAGAGACAGAGTGTTTCAGCGGATAACGACAGAGTGGAGTATGAAGTGCATATGTTGGAGAAGAAGGTGGTTGATAGTGAGGAGAAGGCCGGAGATCGGGGTAATGTGGCTGCATTCAAAGCTCGTGGCGGGCCTCGGGGTATGTACGAGGTGGTGAGGGAAATTCAGGTTCAGTTTGTGAGAGCTTCAGAGTGTGGAAATGAGCTTGCCAAAATGCTGGAGGTGGGAAAGCACCCATACCACCCAAAAAATCAAGTTTCTTCGAAGATGTTGCATGCCATTTCTCCTTCGGTAGCCGCTTTAGTATCCTCACAGCCTGCTACTTCCAAAAATGCCGAGTCCTCGGCTTCCGGTGAGAAGGCTGATCCTATGGAGTTGGAATTTGATGGAGGTGCCGGGATGAGATCAGGAAATCTCTCTTCTACCTTACAAAAGCTGCATCTTTGGGAGAAGAAACTCTATGATGAAGTCAAGGTTGAGGAAAAAATGAGAGTAGCCCATGAGAGGAAGAGTCGGAAGTTGAAGCGTCTGGATGAAAGGGGTGCTGAGGCTCACAAAGTTGATTCGACCAGAAGTATGATCAGGAGTCTTTCCACAAAAATAAGAATTGCCATTCAGGTTGTTGAAAAGATTTCTCTAAAGATAAATAAGTTAAGAGATGATGAGTTGTGGCCACAACTAAATGAATTAATTCAAGGCCTAACCAGGATGTGGAAATCTATGCTTGAATGTCACCGTAGTCAGTGTCAAGCAATCCGAGAAGCTAGAAATTTAGATGTCATTTCATCTCACAAGCTTAGTGACGCCCATCTTGATGCCACATTGCGGCTTGAACGTGATCTTCTTCACTGGACTTCAATGTTCTCTAGTTGGATTGCTGCCCAGAAGGGTTATGTCAGAGCCTTGAATAATTGGCTCGTAAAATGTCTTCTATATGAGCCAGAAGAAACAGCAGATGGAATAGCTCCCTTCTCTCCTGGGAGGGTGGGTGCACCTCCTGCATTTGTAATTTGCAATCAGTGGTCACAAGCTATGGATAGGATTTCTGAGAAAGAAGTTGTGGACTCTATTCGTGTTTTTGCCAAGAGTATTTTTCAGCTTTGGGAACGGGGTAGACTAGAAATGCGCCAGAGGGCGCTGGTTGATAAGGATTTAGAGCGGAAAGTTAAGGACTTGGATAGGGAGGACCAGAAGATTCAGAAGGAGATTCAAGCCTTGGACAAAAAGATGGTTCCGATTGCAGGGCACAGTGACGGCCTCGCATTAGCTGGACATCTTGTGTACCAAAGTGAAACCAGCAGTAATAATAGTATACATGCGAATTTGCAACATATTTTTGAATCCATGGAGAGGTTCACAGCTAACTCCTTGAGAGCCTATGAGGAGCTTTTACAACGAATTGAAGAAGATAAGCTTGCTGAGGCATGA 2439 0.4748 MGCTTSKIDDLPAVALCRERCACLDDAIQQRYTFAAYHVAYMKSLQVIGGSLQEFFDLDLDGSAVSPVLPLPVQKKGDHEVQREIKLKAEPSGLSPAAAALNDRSNSNSGSHLNFHSDSDDEDGSMESLHHSEHYSPRHGYQDHLGYDEEALSSFPRGFMNVNMNFMKNQATQSVTYQHRPASPEKMHMGEASYYPYAYPNNNPSSYPYGYGGGNYGYYGQQPQQPYGASSPAMATGASSSKPPPPPPSPPSSSAWDFFNPFESYDKYYPPYTPSRDSKDLREEEGIPDLEDEDYLHEVVKEIHGNQKFVDGGGGGGNYAKMMENQSEKVDNMDAHYQRQSVSADNDRVEYEVHMLEKKVVDSEEKAGDRGNVAAFKARGGPRGMYEVVREIQVQFVRASECGNELAKMLEVGKHPYHPKNQVSSKMLHAISPSVAALVSSQPATSKNAESSASGEKADPMELEFDGGAGMRSGNLSSTLQKLHLWEKKLYDEVKVEEKMRVAHERKSRKLKRLDERGAEAHKVDSTRSMIRSLSTKIRIAIQVVEKISLKINKLRDDELWPQLNELIQGLTRMWKSMLECHRSQCQAIREARNLDVISSHKLSDAHLDATLRLERDLLHWTSMFSSWIAAQKGYVRALNNWLVKCLLYEPEETADGIAPFSPGRVGAPPAFVICNQWSQAMDRISEKEVVDSIRVFAKSIFQLWERGRLEMRQRALVDKDLERKVKDLDREDQKIQKEIQALDKKMVPIAGHSDGLALAGHLVYQSETSSNNSIHANLQHIFESMERFTANSLRAYEELLQRIEEDKLAEA* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0274 812 MobiDBLite consensus disorder prediction 115 142 - -
Vvi3g0274 812 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Vvi3g0274 812 Pfam Protein of unknown function (DUF632) 385 701 IPR006867 -
Vvi3g0274 812 MobiDBLite consensus disorder prediction 222 238 - -
Vvi3g0274 812 MobiDBLite consensus disorder prediction 99 114 - -
Vvi3g0274 812 MobiDBLite consensus disorder prediction 439 453 - -
Vvi3g0274 812 Coils Coil 719 746 - -
Vvi3g0274 812 MobiDBLite consensus disorder prediction 239 254 - -
Vvi3g0274 812 Coils Coil 346 366 - -
Vvi3g0274 812 MobiDBLite consensus disorder prediction 439 463 - -
Vvi3g0274 812 MobiDBLite consensus disorder prediction 87 142 - -
Vvi3g0274 812 PANTHER UNCHARACTERIZED 1 802 - -
Vvi3g0274 812 MobiDBLite consensus disorder prediction 222 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0274 Vvi-Chr3 2403446 2408906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0274 1 76 Acyl Lipid Metabolism Gene Families AT2G27090 33.735 1.43e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0274 - - vvi:100264167 1531.54