Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0273 ATGGCGTCGAAGCTCCCAACACAACTGGCCACTGCTCGCAGTCTGGACTCACGTGGCCACCATTCCAAGCCCAAACCCTCCTCACTCTCGTGGCGCACCACCCTCTCTTCAAACGGTGTCGTTCCATCCCCTCTCACTTCTTCCAATTTGTCCTTTAACGGTCTTCCAAAACGATCTGTTTTGCCGGTGGTGAGGTGCAGCGGTGCGGCGGTGAATCTGGGGCCGGGTACCCCGGTGAGGTCGACGAGTGTGCTGGTGGTTGGGGCGACGGGGACGCTGGGGAGGCAGGTGGTGAGGAGGGCTCTGGATGAAGGGTATGATGTGAGGTGCCTTGTTAGGCCCAGACCTGCTCCTGCTGACTTTCTTCGTGATTGGGGTGCCATTGTTGTTAATGCTGATTTAACCAAACCAGAGACCATACCTGCAACATTGGTTGGCATTCACACAGTCATCGACTGTGCAACAGGGCGTCCAGAAGAGCCTATTAAAACGGTAGACTGGGAAGGAAAAGTTGCTCTTATACAATGTGCAAAAGCAATGGGAATCCAGAAGTATGTGTTCTTTTCCATTCACAACTGTGACAACCATCCTGAAGTTCCATTAATGGAAATCAAGTATTGCACTGAGAAGTTTCTTCAGGACATAGGCCTAACCCACATCATAATCCGGTTGTGTGGTTTCATGCAGGGCCTAATTGGGCAGTATGCAGTACCTATACTAGAAGAGAAATCTGTGTGGGGAACAGATGCTACCACACGAATAGCATATATGGATACTCAGGATATTGCTCGGTTGACATTTATAGCCTTGCGCAATGAGAAAATTAATGGGAAGCTTCTCACATTTGCTGGGCCCCGTGCATGGACAACACAAGAGGTGATTACATTGTGCGAGAGGCTTGCTGGCCAAGATGCAAATGTAACTACAGTCCCTGTGTCTGTCTTGAAATTGACTCGCCAACTGACCCGATTGTTTGAGTGGACAAATGATGTTGCAGATCGATTAGCATTTTCAGAGGTTCTTACTAGTGATACTGTTTTCTCGACTTCGATGACTGAGACGTATGATCTGCTTGGTGTGGATCCAAAAGACATAGTTACACTGGAGAAATATTTGCAAGATTACTTCACAAACATACTGAAGAAATTGAAAGACCTCAAAGCACAATCAAAGCAAAGTGACTTTTACATCTGA 1194 0.4774 MASKLPTQLATARSLDSRGHHSKPKPSSLSWRTTLSSNGVVPSPLTSSNLSFNGLPKRSVLPVVRCSGAAVNLGPGTPVRSTSVLVVGATGTLGRQVVRRALDEGYDVRCLVRPRPAPADFLRDWGAIVVNADLTKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALIQCAKAMGIQKYVFFSIHNCDNHPEVPLMEIKYCTEKFLQDIGLTHIIIRLCGFMQGLIGQYAVPILEEKSVWGTDATTRIAYMDTQDIARLTFIALRNEKINGKLLTFAGPRAWTTQEVITLCERLAGQDANVTTVPVSVLKLTRQLTRLFEWTNDVADRLAFSEVLTSDTVFSTSMTETYDLLGVDPKDIVTLEKYLQDYFTNILKKLKDLKAQSKQSDFYI* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0273 397 CDD SDR_a5 84 286 - -
Vvi3g0273 397 MobiDBLite consensus disorder prediction 1 15 - -
Vvi3g0273 397 MobiDBLite consensus disorder prediction 1 33 - -
Vvi3g0273 397 Gene3D - 83 373 - -
Vvi3g0273 397 PANTHER - 58 397 IPR044256 -
Vvi3g0273 397 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 84 372 IPR036291 -
Vvi3g0273 397 FunFam uncharacterized protein ycf39 isoform X1 83 373 - -
Vvi3g0273 397 Pfam NmrA-like family 84 305 IPR008030 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0273 - - vvi:100241886 794.653