Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0272 ATGAAGAAGAAGAACCGCGAAGCAGCCTCCGGACTCCGCCTCCTGCTCCTCCGGCGCCGCCGGTTACAGTCTCGCCTCCGCCTCCTCGCTCCGGTGGTCTCCGCCGTGTCCGGCGTCATTCTCCTTCTCTTCGCGCTGTTCACTTTCCTTGCTCCGGCTCCGATCAGCAGAAATGAGCTCCTCTTCCGCCGGAACAGCTCGTTGAGCAGTGGATTGGAGGCTCAATCGAGTGCCGATCGGGACGTTGTATTTCGTGTTCCGGCTACTGGAGGGAGTTTAGGTAATGATATGTGGACTTCGAGGTTATCGAAATTCTACTATGGTTGCAGTAATGCTAGCGTTAAGTTCTCCAAAGTTGGTGTCAGCACACAACGGAATAGATACTTGTTGATTGCTACCAGTGGAGGCTTAAATCAACAAAGAACAGGGATAACAGATGCAGTTGTTGCAGCTCGTATTTTGAATGCCACTCTTGTTGTTCCCAAGTTGGACCAGAAATCTTTTTGGAAGGATAGCAGCAACTTTGCTGAAATCTTTGATGCGGATTGGTTTATTTCATTTCTATCAAAAGATGTTAAAATCATTAAACAGCTTCCTAAAGAGGGAAGGAAGATTATGGCTCCATATACCATGCGTGTTCCAAGGAAGTGCACTCCAAGTTGCTATCAGAAACGTGTCTTACCTGTTCTCACTAAAAAGCATGCTGTTCAGCTCACTAAGTTTGATTATAGGCTTTCAAATAGGCTGGACATGGATTTACAAAAGCTGAGATGCAGAGTTAACTACCATGCTTTGAAATTTACCAATTCAATTCTTGAAATGGGTAAAAAGTTGGTTGAGAGGATGAGGATGAAAAGCAAGCATTTCATTGCCCTGCATTTGAGGTTTGAACCTGATATGCTTGCATTCTCTGGATGCTATTATGGTGGAGGAGAAAAAGAAAGGACAGAACTGGGCGCATTAAGGAAGAGGTGGAAAACTTTACATATACGCAACCCTGATAAGGAAAGGAGGCAGGGAAAATGCCCCCTCACTCCAGAGGAAGTTGGTCTTATGCTGAGAGCATTGGGTTTTGGTAGTGATGTTCACATCTATGTGGCATCTGGTGAAGTATACGGAGGTGAAACAACATTAGCACCCCTCAAGGCACTCTTCCCAAATTTCCATTCAAAAGATACTATAGCCAGTGAGGAAGAGCTGGCCCCATTTTCGTCCTTTTCTTCTCGTATGGCTGCCCTAGACTTCATTGTTTGTGATGAAAGTGATGTTTTTGTCACCAACAACAATGGCAACATGGCTAGAATGTTGGCTGGACGAAGGAGATACTTTGGCCATAAACCCACAATCCGACCCAATGCTAAAAAGCTCTATCGCTTGTTCATGAATCGAAATAACATGACATGGGAAGAGTTTGCCTCTGGGGTGCGAAGTCGTCAAATTGGCTTCATGGGGGAGCCAAATGAGGTAAGGCCTGGCAGGGGCGAGTTTCATGAAAACCCGTCCTCCTGCATATGTGAACTTCCTGAAGCCAAGGCCAGAGGAGATTTAGGTTCTAAAGTACAGGCTAATGTCGGGACTGAGGACCTGAGCACAGGAAAGGATAGTGAACAGGCGGATGAGCAGCCAACTGAGGATGAGCATGATTGGATTGATATGGACTATTCAGAGAATGAAAATGGCCTTCAAGGGAAAGGGTCCCTCAACCTAACAGACTCAGATTTGGGCGGTCTTCTCAAGGCCGATCCCCAGCCAGAATTGGAAGAGATGTTCTCGGACTAG 1779 0.4643 MKKKNREAASGLRLLLLRRRRLQSRLRLLAPVVSAVSGVILLLFALFTFLAPAPISRNELLFRRNSSLSSGLEAQSSADRDVVFRVPATGGSLGNDMWTSRLSKFYYGCSNASVKFSKVGVSTQRNRYLLIATSGGLNQQRTGITDAVVAARILNATLVVPKLDQKSFWKDSSNFAEIFDADWFISFLSKDVKIIKQLPKEGRKIMAPYTMRVPRKCTPSCYQKRVLPVLTKKHAVQLTKFDYRLSNRLDMDLQKLRCRVNYHALKFTNSILEMGKKLVERMRMKSKHFIALHLRFEPDMLAFSGCYYGGGEKERTELGALRKRWKTLHIRNPDKERRQGKCPLTPEEVGLMLRALGFGSDVHIYVASGEVYGGETTLAPLKALFPNFHSKDTIASEEELAPFSSFSSRMAALDFIVCDESDVFVTNNNGNMARMLAGRRRYFGHKPTIRPNAKKLYRLFMNRNNMTWEEFASGVRSRQIGFMGEPNEVRPGRGEFHENPSSCICELPEAKARGDLGSKVQANVGTEDLSTGKDSEQADEQPTEDEHDWIDMDYSENENGLQGKGSLNLTDSDLGGLLKADPQPELEEMFSD* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0272 592 CDD O-FucT_plant 128 448 IPR024709 -
Vvi3g0272 592 PANTHER O-FUCOSYLTRANSFERASE 16 21 590 - -
Vvi3g0272 592 Pfam GDP-fucose protein O-fucosyltransferase 128 442 IPR019378 -
Vvi3g0272 592 MobiDBLite consensus disorder prediction 525 592 - -
Vvi3g0272 592 PIRSF UCP009360 1 513 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0272 Vvi-Chr3 2374785 2379593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0272 128 513 Miscellaneous Gene Families AT1G22460 43.521 1.16e-100 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0272 - - vri:117908543 1155.58