Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0271 ATGGCCAACGCTCCCGATAATAAGCTCACTTCCTCAAGCTCCGAGCTCGACTTGGATCGCCCCAATCTCGAAGACTACCTTCCCTCCGGATCCATGCAAGAACCTCGCGGCAAGCTTCGCCTTGATTGTGGATTGGTGGATTGGTGGACTGTGTGCAGGCGTGATTTATTGGACATTTCGCCGACCCTAACCGAGGCTGCTGGGGCCATTGTTGACGACTCTTTCACACGATGTTTCAAGTCGAACCCTCCGGAGCCTTGGAACTGGAATGTGTATTTGTTTCCTCTTTGGTGTTTGGGAGTGGTAATTCGATATGGAATTTTATTTCCCACAAGGGTTCTAGTACTCACACTGGGGTGGATAATATTCCTTTCATCCTTTATTCCAGTACATTTTCTATTGAAGGGAAACGATAAGTTGAGGAAAAAGTTGGAGAGATGTCTAGTGGAGTTAATTTGCAGCTTCTTTGTTGCATCATGGACTGGAGTTGTCAAGTACCATGGGCCACGGCCTAGCAGGAGGCCTCAGCAGGTTTTTGTTGCCAATCATACTTCCATGATTGATTTTATCGTTTTAGAACAGATGACTGCATTTGCAGTTATTATGCAGAAGCATCCTGGCTGGGTTGGATTGCTGCAAAGTACCATTTTGGAGAGTGTAGGATGTATCTGGTTCAATCGTACAGAAGCAAAGGACCGTGAAATTGTTGCTAGGAAGCTAAGGGATCATGTTCAGGGGGCTGACAACAACCCTCTTCTCATATTCCCAGAAGGAACTTGTGTGAATAACCACTACACTGTCATGTTCAAGAAGGGCGCATTCGAACTTGGCTGCACTGTTTGCCCTATTGCAATAAAGTACAATAAGATTTTCGTTGATGCTTTCTGGAACAGTAAGAAGCAATCCTTTACAATGCATCTTCTGCAGCTTATGACATCCTGGGCTGTCGTTTGTGATGTTTGGTACTTAGAGCCCCAAACATTGAAGCCAGGAGAGACACCCATTGAATTTGCAGAGAGGGTCAGGGACATAATTTCTCTTCGAGCTGGTTTGAAAAAGGTTCCTTGGGATGGATATTTGAAGTACTCTCGCCCTAGCCCAAAGCATAGAGAGCAGAAGCATCACATTCCTTGCTGCACACCTGATTTCCCCCCCTAG 1158 0.4594 MANAPDNKLTSSSSELDLDRPNLEDYLPSGSMQEPRGKLRLDCGLVDWWTVCRRDLLDISPTLTEAAGAIVDDSFTRCFKSNPPEPWNWNVYLFPLWCLGVVIRYGILFPTRVLVLTLGWIIFLSSFIPVHFLLKGNDKLRKKLERCLVELICSFFVASWTGVVKYHGPRPSRRPQQVFVANHTSMIDFIVLEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRTEAKDREIVARKLRDHVQGADNNPLLIFPEGTCVNNHYTVMFKKGAFELGCTVCPIAIKYNKIFVDAFWNSKKQSFTMHLLQLMTSWAVVCDVWYLEPQTLKPGETPIEFAERVRDIISLRAGLKKVPWDGYLKYSRPSPKHREQKHHIPCCTPDFPP* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0271 385 MobiDBLite consensus disorder prediction 365 385 - -
Vvi3g0271 385 CDD LPLAT_LPCAT1-like 152 362 IPR045252 GO:0008374
Vvi3g0271 385 MobiDBLite consensus disorder prediction 1 17 - -
Vvi3g0271 385 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 108 296 - -
Vvi3g0271 385 Pfam Acyltransferase 164 285 IPR002123 GO:0016746
Vvi3g0271 385 SMART plsc_2 177 288 IPR002123 GO:0016746
Vvi3g0271 385 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 64 371 - -
Vvi3g0271 385 MobiDBLite consensus disorder prediction 1 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0271 164 351 Acyl Lipid Metabolism Gene Families AT1G80950 25.758 1.10e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0271 K13506 - vvi:100243463 742.265