Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0263 ATGGAGAGGAAGGTGGGCATCATAGGAGCGGGAATCAGCGGCCTCCTAGCCTGCAAGTATACCCTCTCCAAGGGCTACACCCCGGTCGTCTTTGAATCCCGGAGCAGCATCGGGGGAGTATGGACCAAGACACTCGAGACTACTAAGCTACAAACACCCAAACCAATCTTCCAATTCTCTGACTTTCCATGGCCATCTTCAGTAGTTGAAGATTTTCCGAGCCATTCCCAAGTTCTTGATTATCTTCAGTCCTATGCCCATCATTTTGGCTTGCTCCGCCACATCAAATTCAACTCTAAAGTCCTCAGCATCTCCTATGAAGGCCCACCGGAGGAGGAGATGCAGGCATGGGAGCTGTGGGGTGGAGCCGGTGAGCCCTTTGGCTCTAAAGGGAAATGGAATCTTACTGTAAACGACACACACAACCTCTCAACTGAGGTTTACCAAGTGGATTTTCTTATCCTCTGCATCGGACGGTTCAGCGATGTGCCTAACATCCCAGAATTTCCAGCGGGCAAAGGCCCAGAAATGTTCCATGGAAAGGTGATACATTCCATGGAGTATGCTGCCATGGATTTCGAGAGAGCAGCTGAATTCATCAAAGGGAAAAGAACAACTGTGGTTGGATTCCAGAAACATGCCCTGGACATCGCGATGGAGTGCTCAACAGCAAATGGAGGGGAACATCCATGTAGAGTCTTGTACAAGACGGAGCACTGGACTGTCACGGATTACCAACCATGGGGGGTACCTCTAGCTTATCTGTATCTTAACCGCTTCTCGGAGCTTCTGATTCATAAGCCTGGTGAAGGGTTCCTTCTCAGCCTCCTGGCAACCATTCTTTCACCTGTGAGATGGGGGTTCTCCAAGTTTGTCGAATCTTATATAAAGAGGAAGCTGTCCCTTGAAAAGTTTGGGATGGTACCAAAACACAGCTTTCTCAATGAGATCAGCTCTTGTTTGATCTCAACATTGCCAGAAGGGTTCTATGATAGAGTTGAAGGGGGAAGCATCCTTTTGAAGAAAGCTCCCAAGTTTGGCTTCTGCAAAGAAGGAATTGTGGTAGATGGAGAGAGCACACCTCTAGAGACGGATTTGGTCATATTGGCAACTGGGTTCAAAGGAGATGAGAAGCTCAAAGACATTTTTGTGTCTCCAACCTTCAGAGACTACATTATCGGCTCTCCAACTGCATCTCTTCCACTCTATAGGGAATGCATTCATCCTAGAATTCCACAGCTAGCGGTGATTGGATTCTCAGAGAGTGTTTCAAATTTGTACACATCGGAGATGAGGTGCCGGTGGGTAGCAGAGCTTCTTGATGGCAAATTCAAGCTGCCAAGCATCAAGGAGATGGAGAAGGATGCAGAAAGATGGGACAAATACATGAAGCAATACTCCGGTGAATACTACAGGAGATCATGCATAGGTGCTGTTCATATATGGTACAATGATCAACTCTGTAAGGACATGGGATGGAATCCTAAGAGAAAGAAGGGGTTCATTCCTGAACTGTTCCAGCCTTATGGCCCAATGGACTACTGCCCATCCTAA 1554 0.4743 MERKVGIIGAGISGLLACKYTLSKGYTPVVFESRSSIGGVWTKTLETTKLQTPKPIFQFSDFPWPSSVVEDFPSHSQVLDYLQSYAHHFGLLRHIKFNSKVLSISYEGPPEEEMQAWELWGGAGEPFGSKGKWNLTVNDTHNLSTEVYQVDFLILCIGRFSDVPNIPEFPAGKGPEMFHGKVIHSMEYAAMDFERAAEFIKGKRTTVVGFQKHALDIAMECSTANGGEHPCRVLYKTEHWTVTDYQPWGVPLAYLYLNRFSELLIHKPGEGFLLSLLATILSPVRWGFSKFVESYIKRKLSLEKFGMVPKHSFLNEISSCLISTLPEGFYDRVEGGSILLKKAPKFGFCKEGIVVDGESTPLETDLVILATGFKGDEKLKDIFVSPTFRDYIIGSPTASLPLYRECIHPRIPQLAVIGFSESVSNLYTSEMRCRWVAELLDGKFKLPSIKEMEKDAERWDKYMKQYSGEYYRRSCIGAVHIWYNDQLCKDMGWNPKRKKGFIPELFQPYGPMDYCPS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0263 517 Gene3D - 1 175 IPR036188 -
Vvi3g0263 517 PANTHER DIMETHYLANILINE MONOOXYGENASE 3 505 - -
Vvi3g0263 517 FunFam Flavin-containing monooxygenase 1 174 - -
Vvi3g0263 517 FunFam Flavin-containing monooxygenase 175 253 - -
Vvi3g0263 517 Pfam Flavin-binding monooxygenase-like 3 496 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi3g0263 517 PIRSF FMO 1 504 IPR000960 GO:0050660|GO:0050661
Vvi3g0263 517 SUPERFAMILY FAD/NAD(P)-binding domain 356 514 IPR036188 -
Vvi3g0263 517 Coils Coil 449 469 - -
Vvi3g0263 517 FunFam Flavin-containing monooxygenase 353 506 - -
Vvi3g0263 517 Gene3D - 353 504 IPR036188 -
Vvi3g0263 517 Gene3D - 176 251 IPR036188 -
Vvi3g0263 517 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vvi3g0263 517 SUPERFAMILY FAD/NAD(P)-binding domain 2 227 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0263 Vvi-Chr3 2267331 2269351 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0263 K00485 - vvi:100243508 1072.38