Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0262 ATGGAGAGGAAGGTGGCCATAATCGGAGCAGGCATCAGTGGCCTCCTAGCCTGCAAGTATACCCTCTCCAAGGGCTATACTCCGGTTGTTTTCGAGTCCCGGAGCAGCATCGGCGGAGTTTGGACCCAGACTTTCGAGACTACAAAGCTCCAAACACCCAGATCCGTCTACCAGTTCTCAGACTTCCCATGGCCATCTTCTGTACCAGAGTTTCCCAACCATTCCCAAGTACTAGATTATATTGTCTCTTATGCTACCCACTTCAACTTGCTCCCCCACATCAAGTTTAACTCTGAAGTCCTCGGCATCGAGTATGAAGGCCCATCGGATGAAGAGGTGCAGGCATGGGAGCTCTGGAGCGGTACCGGTGAGCCCTTCAACTCTAAAGGGAAATGGAGCATTACAGTGAAGGACACAAACAGCCTTTCAACTGAGGTTTACCAAGTGGGCTTTGTTATCCTATGTGTTGGACAATACAGCGACGTTCCAAAGATCCCAGAATTTCCAGCAGGCAAAGGCCCAGAAGCGTTCCGTGGAAAGGTGATACATTCAATGGAGTATGCAGCCATGGATTTCGAGAGAGCAGCTGAATTCATCAAAGGGAAAAGAACTACTGTGGTTGGATTCCAGAAATCTGCGCTGGACATCGCAATGGAGTGCTCAGCAGCAAATGGAGCGCTGAATCCATGCAGACTGTTATACAGGACCGAGCACTGGAACATCCCGGATTACTATCCATGGGGGGTGCCTCTAGCTTATCTGTATTTTAACCGCTTTGCGGAGCTTTTGGTTCACAAGCCTGGTGAAGGCTTCTTTCTGAGTCTCCTAGCTACCATTCTTTCACCTTTGAAATGGGGGTTCTCAAAGTTTGTGGAAACCTATGTAAATCAGAAGCTGTCCCTGGCAAAGTTTGGGATGGTACCGGAGCAAAGTTTTCACAAAGACATCAGTTCTTGTTTGATATCATCAATGCCGGAGGAGTTCTATGATAGAGTTGAGAAGGGAAGCATCATTCTGAAGAAAGCTCCCAAGTTCAGCTTCTGCAAAGAAGGCATTGTGGTTGACGGTGAGGCTTCACCTCTGGAGTCGGATTTGGTCATATTGGCAACAGGGTTCAAGGGAGATGAGAAGCTCAAAGACATATTTGTGTCCCCCACCTTTCAGAACCACATCATTGGCTCCCCAAATGCATCAATCCCACTCTTCAGGCAATGCATTCATCCTCGAGTTCCACAACTAGCGGTGATTGGATTCTCAGAGAGTGTTTCAAACTTGTACACGTCGGAGATGAGGAGCCGGTGGCTGGCGGAGTTTCTCGACGGCACATTCAAGCTGCCAAGCATTAAGGAGATGGAGAAAGATGCAGAAAGATGGGACCAGTACCTGAAGCGATGCTCAGAGAAGCACTACCGGAGATCATGCATAGCAGCTCTTCATATATGGTACAATGATCAACTCTGCAAGGACATGGGGTGGAACCCTAAGAGGAAGAAGGGGTTTTTTGCTGAATTGTTTGAGCCTTATGGTCCCCTGGATTACCGTCCAATATCTTGA 1554 0.4833 MERKVAIIGAGISGLLACKYTLSKGYTPVVFESRSSIGGVWTQTFETTKLQTPRSVYQFSDFPWPSSVPEFPNHSQVLDYIVSYATHFNLLPHIKFNSEVLGIEYEGPSDEEVQAWELWSGTGEPFNSKGKWSITVKDTNSLSTEVYQVGFVILCVGQYSDVPKIPEFPAGKGPEAFRGKVIHSMEYAAMDFERAAEFIKGKRTTVVGFQKSALDIAMECSAANGALNPCRLLYRTEHWNIPDYYPWGVPLAYLYFNRFAELLVHKPGEGFFLSLLATILSPLKWGFSKFVETYVNQKLSLAKFGMVPEQSFHKDISSCLISSMPEEFYDRVEKGSIILKKAPKFSFCKEGIVVDGEASPLESDLVILATGFKGDEKLKDIFVSPTFQNHIIGSPNASIPLFRQCIHPRVPQLAVIGFSESVSNLYTSEMRSRWLAEFLDGTFKLPSIKEMEKDAERWDQYLKRCSEKHYRRSCIAALHIWYNDQLCKDMGWNPKRKKGFFAELFEPYGPLDYRPIS* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0262 517 PANTHER DIMETHYLANILINE MONOOXYGENASE 3 509 - -
Vvi3g0262 517 Gene3D - 346 506 IPR036188 -
Vvi3g0262 517 Gene3D - 174 248 IPR036188 -
Vvi3g0262 517 FunFam Flavin-containing monooxygenase 1 173 - -
Vvi3g0262 517 SUPERFAMILY FAD/NAD(P)-binding domain 355 514 IPR036188 -
Vvi3g0262 517 FunFam Flavin-containing monooxygenase 352 505 - -
Vvi3g0262 517 FunFam Flavin-containing monooxygenase 174 252 - -
Vvi3g0262 517 PIRSF FMO 1 504 IPR000960 GO:0050660|GO:0050661
Vvi3g0262 517 SUPERFAMILY FAD/NAD(P)-binding domain 2 274 IPR036188 -
Vvi3g0262 517 Coils Coil 448 468 - -
Vvi3g0262 517 Gene3D - 1 173 IPR036188 -
Vvi3g0262 517 Pfam Flavin-binding monooxygenase-like 3 495 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi3g0262 517 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0262 Vvi-Chr3 2253382 2255550 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0262 K00485 - vvi:100248647 1068.53