Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0261 ATGGAGAGGAAGGTAGCCATCATAGGAGCTGGCATCAGTGGCCTCCTTGCCTGCAAGTATACCCTCTCCAAAGGCTTCACTCCGGTTGTTTTCGAGTCCCGGAGCAGCATCGGCGGAGTATGGAGGAAGACACTAGAGACTACAAAGCTCCAAACACCCAAACCATTCTACCAGTTCTCAGATTTCCCATGGCCATCTTCAGTGAAAGAAGAGTTCCCTAACCAGTTCCAATTGTTCGATTATCTGCAGTCCTATGCTCGCCATTTCGACTTGCTCAGGCACATCAAGTTCAATAGTAAGGTGGTGAGTATCGAGTATGAAGGGGCTTCAGATGAAGAGATGCAGGCATGGGAGCTGTGGGGAGGCAATGGTGAGGCGTTCAGCTCTAAAGGGAAATGGAACCTTACTGTGACCGACACACAGATCCTTTCAACTGAGGTTTACCAAGTGGACTTTGTTATTCTCTGCATTGGACGGTTCACAGATGTTCCAAACATCCCAGAATTTCCCCCCGGTAAAGGCCCAGAGGCGTTCCATGGAAAGGTGATACATTCCATGGAGTATTCCGCCATGGATTTTGCAAGTGCAGCAGAATTCATCGAAGGGAAACGAACAGCTGTGGTTGGTTTCCAGAAACACGCACTGGACATATCGATGGAGTGTTCAGCAGCAAATGGAGAGCAAAATCCATGCAGACTGTTATACAAGACTGAGCACTGGAACGTCCCTGATTATCAGCCATGGGGAGTGCCACTGGCTTATCTGTATTTTAGTCGCTTCTCAGAGCTTCTAGTTCATAAGCCTGGTGAAGGGTTCTTTCTGAGTCTCCTAGCAACCATTCTTTCACCTGTGAGATGGGGATTCTCAAAGTGGGTGGAATCTCATATAAAGAAGAAGCTGTCCCTAGAAAAGTTTGGGATGGTACCAAAACATAGCTTTCTCAAAGAGATTAGCGCTTGTTTGATCTCAACAGTGCCAGAGGGGTTCTATGATAGAGTTGAAAAGGGAAGCATCATTTTGAAGAAAGCTCCAAAGTTTAGCTTCTGCGAACAAGGCATTGTGGTTGATGGCGAGACCACTCCTATAGAAACGGATTTGGTCATTCTGGCTACTGGATTCAAGGGAGAGAAGAAGCTAAAAGATATATTCGTGTCCCCTGCCTTCCAGGACTGCATCCTTGGGTCACCAACCGCATCGGTTCCATTCTATAGCTAG 1215 0.4724 MERKVAIIGAGISGLLACKYTLSKGFTPVVFESRSSIGGVWRKTLETTKLQTPKPFYQFSDFPWPSSVKEEFPNQFQLFDYLQSYARHFDLLRHIKFNSKVVSIEYEGASDEEMQAWELWGGNGEAFSSKGKWNLTVTDTQILSTEVYQVDFVILCIGRFTDVPNIPEFPPGKGPEAFHGKVIHSMEYSAMDFASAAEFIEGKRTAVVGFQKHALDISMECSAANGEQNPCRLLYKTEHWNVPDYQPWGVPLAYLYFSRFSELLVHKPGEGFFLSLLATILSPVRWGFSKWVESHIKKKLSLEKFGMVPKHSFLKEISACLISTVPEGFYDRVEKGSIILKKAPKFSFCEQGIVVDGETTPIETDLVILATGFKGEKKLKDIFVSPAFQDCILGSPTASVPFYS* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0261 404 PIRSF FMO 1 384 IPR000960 GO:0050660|GO:0050661
Vvi3g0261 404 SUPERFAMILY FAD/NAD(P)-binding domain 2 227 IPR036188 -
Vvi3g0261 404 FunFam Flavin-containing monooxygenase 1 174 - -
Vvi3g0261 404 PANTHER DIMETHYLANILINE MONOOXYGENASE 3 384 - -
Vvi3g0261 404 FunFam Flavin-containing monooxygenase 175 253 - -
Vvi3g0261 404 Pfam Flavin-binding monooxygenase-like 3 374 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi3g0261 404 Gene3D - 2 249 IPR036188 -
Vvi3g0261 404 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0261 Vvi-Chr3 2246349 2248358 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0261 K00485 - vvi:100248597 828.935