Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0240 ATGGACTCCCTGGCTCTGTTTTGTACAGCTTCTCTTGTCGCCGGCGGTGTGTACTGGTTCGTCTTCCTCCTTGGCGCTGCCGAGCGTAAAGGCAAACGAGCCGTACACCTCTCTGGCGGCTCCATCTCCGGAGACAAAGTCCGGGACAATTACAAGCAATACTGGTCATTCTTCCGCCGTCCTAAGGAGATCGAGACCGCCGAAAAAGTTCCGGCGTTCGTCGACACTTTCTACAACCTCGTCACTGACATTTATGAGTGGGGCTGGGGCCAGTCGTTCCACTTCTCGCCGTCCGTGGCCGGGAAGTCGCACCGAGATGCCACGCGCGTCCACGAAGAGATGGCTGCAGATCTACTCGGAATCCGAGCCGGAGATCGGGTACTCGACGCAGGATGCGGCGTCGGCGGGCCGATGCGAGCCATCGCGAGGCACTCCGGTGCTAATGTAGTTGGAATCACGATCAATGAGTACCAGGTGAACCGCGCTCACTTACACAACAAGAAAGCTGGTCTCGAATCGCAATGCGAGGTGGTATGCGGTAACTTTCTCGAAATGCCGTTCCCGGATAACTCTTTCGACGGCGCCTACTCGATCGAAGCGACGTGCCACGCGCCGAAGCTCGAAGAGGTTTACAGCGAGATTTTTAGGGTTTTGAAGCCTGGGTCAATGTATGTCTCATATGAATGGGTAACTACTGAATTGTACAGAGAAGATGATGCAGAGCATGTGGAGATCATACAGGGAATTGAGAGGGGTGATGCATTGCCTGGACTGAGGAGTTACAGAGACATTGTAGAAATTGCGCGAAAAGTCGGGTTTGAGGTGGTGAAAGAGAAGGATTTGGCGAAGCCTCCGGCAGGGCCGTGGTGGGCTAGGTTGAAGATGGGGAGAATTGCGTATTGGAGGAACCATATACTGGTAACAGTGCTTGGTTGGTTGGGGATTGCTCCGAAAGGGGTTGTTGATGTGCATGAGATGCTGTTCAAGACTGCTGATTATTTGACTAGAGGTGGAGAGACTGGGATTTTCACTCCTATGCACATGATCCTCTGTAGAAAACCCGAATCATAG 1071 0.5313 MDSLALFCTASLVAGGVYWFVFLLGAAERKGKRAVHLSGGSISGDKVRDNYKQYWSFFRRPKEIETAEKVPAFVDTFYNLVTDIYEWGWGQSFHFSPSVAGKSHRDATRVHEEMAADLLGIRAGDRVLDAGCGVGGPMRAIARHSGANVVGITINEYQVNRAHLHNKKAGLESQCEVVCGNFLEMPFPDNSFDGAYSIEATCHAPKLEEVYSEIFRVLKPGSMYVSYEWVTTELYREDDAEHVEIIQGIERGDALPGLRSYRDIVEIARKVGFEVVKEKDLAKPPAGPWWARLKMGRIAYWRNHILVTVLGWLGIAPKGVVDVHEMLFKTADYLTRGGETGIFTPMHMILCRKPES* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0240 356 PANTHER - 1 355 - -
Vvi3g0240 356 Gene3D Vaccinia Virus protein VP39 45 308 IPR029063 -
Vvi3g0240 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 354 IPR029063 -
Vvi3g0240 356 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Vvi3g0240 356 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Vvi3g0240 356 Pfam Sterol methyltransferase C-terminal 292 355 IPR013705 GO:0006694|GO:0008168
Vvi3g0240 356 FunFam Methyltransferase 44 305 - -
Vvi3g0240 356 Coils Coil 154 174 - -
Vvi3g0240 356 CDD AdoMet_MTases 126 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0240 Vvi-Chr3 2054751 2055821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0240 116 221 Acyl Lipid Metabolism Gene Families AT1G73600 31.132 3.93e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0240 K08242 - vvi:100262458 737.643