Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0237 ATGGTGAAATGTGTGGAAGATACGTGGGTTCTGGTGAAGGCAAAAACTCAATCAAGAAAGCTTCAACTCAACTCATCCATGGCAAGATGGTCTCAACTCCCCAAAGACCTCCTTCTCCTAATTGCCCAGCGCCTGAATTCCCATTTCGATCTCCTCTGTCTCCGATCAGTCTGCTCCTCCTGGCATGCTTGTGTCCCCTCCAGACTCCATCCACTCCCTTCCCGTTTCCCGATCCTTCCCACCAATGGAACCTCCTGGGGTTTATATCTTTCTAGGCGCACAATTCTGTGTCTTGGATTACCTGAATCTCACTGCCAACCCACCATCAGTTCCTGGCTGATCAAGGTTGAAGAAGATGTCCCTGATATGGCACACCTGGTGAACCCACTCTCCACATTTCAATTCAAACATCTTCCACCAAATTTCCCAAAAACTTTTGACTTTTCCAGGTTTCGGGTCTCCGAATTAGGGCAAGAGTATGTCCTTCAGTACATGAATCATCGCCCATCCGGAGAGGCTGATGAGGGGAGCTTGCACAAGGGGAAGGTGGCTTTTTCTAGCACCGGCAATGGCGAAGATTTTGTAATGATTACAATTCATGTGTCTGGAAAGTTGGCCATGTTCAGGCATGGAAACAAAAGGTTGATATTAATTAATGATACGCCATCTCCTTGTGATGATTTGATATTCTTTAATGGGGAATTCTATGCCATTGATAACACTGGAAGGACTGTAGTTGTGGCTATTGGATCACCTCCAGTTCTAAGTTTGATCGCTGATTCAGTGTTTGGTGGCGACAAGAAGAGCTTGGTTGAGTCCAATGGCGAATTGTTGATGGTCGATACATACTTTGGTCAGGGGATTCATCGCCGAATGAAGAGAGCAGTTCGGTTTAAGGTTTTCAAGCTAGATCAAATTGGGCATATGTGGGTTGAGGTCGAAAGCTTGGGTAATCGAATCCTGTTTTTGGGTGAGAAAAGTACATTCTCGGCTGTGGCTTCTGAATTTTGTGGGTGTGAAGGGAACTGTATTTACTATACAAATACCTTCTTCTGCCCAAATGGGCAAGGAGATAATGCATATACAGCAATAGATATATTCAATTTAGAGAATGGTAATATGGGGCCTTTATTGAGTTTTCCTGATTATTCCAAGCTAATAGGAGATCATGATGTCGACCATAAGCTCATAGTGCTTGATGTGGGCTTGAAACATTGTGGTCCTTGTGTGAAGGTATATCCAACTGCGCTGAAGCTGTCAAGGCAGATGGCAGACAATTATTTTTGCAAGGATGAACGGGATATTGAAAGTAACTTGAGAATGAAATTTCCCTTTCCTTGTTCTTTTCTGAGATTTTGTGAGGGTTGCAATATGAAAGATGGTTGA 1386 0.4387 MVKCVEDTWVLVKAKTQSRKLQLNSSMARWSQLPKDLLLLIAQRLNSHFDLLCLRSVCSSWHACVPSRLHPLPSRFPILPTNGTSWGLYLSRRTILCLGLPESHCQPTISSWLIKVEEDVPDMAHLVNPLSTFQFKHLPPNFPKTFDFSRFRVSELGQEYVLQYMNHRPSGEADEGSLHKGKVAFSSTGNGEDFVMITIHVSGKLAMFRHGNKRLILINDTPSPCDDLIFFNGEFYAIDNTGRTVVVAIGSPPVLSLIADSVFGGDKKSLVESNGELLMVDTYFGQGIHRRMKRAVRFKVFKLDQIGHMWVEVESLGNRILFLGEKSTFSAVASEFCGCEGNCIYYTNTFFCPNGQGDNAYTAIDIFNLENGNMGPLLSFPDYSKLIGDHDVDHKLIVLDVGLKHCGPCVKVYPTALKLSRQMADNYFCKDERDIESNLRMKFPFPCSFLRFCEGCNMKDG* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0237 461 Gene3D - 30 68 - -
Vvi3g0237 461 Pfam Protein of unknown function (DUF295) 311 369 IPR005174 -
Vvi3g0237 461 SUPERFAMILY Thioredoxin-like 368 430 IPR036249 -
Vvi3g0237 461 SUPERFAMILY F-box domain 25 67 IPR036047 GO:0005515
Vvi3g0237 461 PANTHER F-BOX PROTEIN SKIP23 27 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0237 Vvi-Chr3 2042274 2047495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0237 - - vvi:100248766 747.273