Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0234 ATGCGGAATGCTGAATATGTGGGTTTGGAGGACGATGCTTCTCCCAAGTATGATAACTTCAAGAAGGTTTCCATTATACCTCTTGTTTTCCTTATCTTCTATGAGGTCTCTGGGGGTCCGTTCGGTGTTGAAGACACTGTCCAGGCAGCTGGCCCCCTTTTAGCTCTTCTTGGCTTTCTGCTTTTCCCAGTTATATGGAGCATCCCAGAAGCCTTAATAACTGCAGAAATGGGTACAATGTTCCCGGAGAATGGTGGATATGTGGTTTGGGTTTCTTCGGCTTTGGGCCCCTATTGGGGTTTTCAGCAAGGTTGGATGAAGTGGTTGAGTGGAGTCATTGATAATGCGCTATACCCAGTTCTGTTTCTAGATTATCTGAAATCAGCAATCCCAGGTTTAGAAGGTGGGTTGCCTAGGATAATAGCGGTTCTAGCTTTGACTCTGGCTCTCACTTACATGAACTACAGAGGTTTGACCATTGTGGGATGGGTTGCTGTGCTATTAGGAGTGTTCTCAATTCTTCCTTTTGTCGTTATGGGACTGGTGGCAATTCCTGAACTGGAGCCTTCAAGATGGTTTGTTATAGACCTGCACAATGTAAACTGGGGTTTGTATTTAAACACTCTCTTCTGGAATCTGAACTACTGGGACTCAATCAGTACTCTTGCAGGAGAGGTGGAGAACCCCAATAAAACTCTACCAAAAGCTCTTTTTTATGCTCTTATTTTGGTTGTTCTAGGGTATTTTGTTCCTCTTCTGGTTGGTACAGGAGCTATACCACTTGATCGGGAGATGTGGGTTGATGGGTATTTCGCAGATATTGCTAAGATTCTAGGAGGTATATGGTTACGAAGTTGGATCCAAGGGGCCTCAGCTCTGTCAAACATGGGGATGTTTGTGGCCGAGATGAGCAGTGACTCCTTTCAGCTTTTGGGGATGGCAGAACGTGGGATGCTCCCGGATTTCTTTGCCAAGAGGTCTCGCTATGGGACCCCTCTTACTGGGATTTTATTTTCTGCATCTGGTGTGATTTTGCTCTCATGGTTGAGCTTTCAAGAGATTGTAGCTGCAGAGAACTTCTTATACTGTTTTGGAATGATTATGGAATTCATAGCATTTGTAAAGTTAAGGATGAGATACCCAGCAGCATCCCGGCCTTATATGATACCTGTTGGTACAACTGGAGCAATTTTGATGTGTATACCCCCAACCTTATTGATTTGTGTGGTATTAGCTCTTGCTTCTTTCAAAGTCATGGTTATTAGTCTCTTGGCTGTGATGATTGGGCTTGTTATGCAGCCTTGTCTCCTTTATGCTGAGAAAAAGAGATGGCTCAGGTTCTCCATGAGTTCTGACCTTCCAGATTTTCATTCTGCCTACCATGGAGATACCGAATCAGGGAAACAAAGAAGAGAAGAAGAAGAAGAAGAAGAAGACGGTTTTGCTTCTCAATAA 1455 0.4399 MRNAEYVGLEDDASPKYDNFKKVSIIPLVFLIFYEVSGGPFGVEDTVQAAGPLLALLGFLLFPVIWSIPEALITAEMGTMFPENGGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAIPGLEGGLPRIIAVLALTLALTYMNYRGLTIVGWVAVLLGVFSILPFVVMGLVAIPELEPSRWFVIDLHNVNWGLYLNTLFWNLNYWDSISTLAGEVENPNKTLPKALFYALILVVLGYFVPLLVGTGAIPLDREMWVDGYFADIAKILGGIWLRSWIQGASALSNMGMFVAEMSSDSFQLLGMAERGMLPDFFAKRSRYGTPLTGILFSASGVILLSWLSFQEIVAAENFLYCFGMIMEFIAFVKLRMRYPAASRPYMIPVGTTGAILMCIPPTLLICVVLALASFKVMVISLLAVMIGLVMQPCLLYAEKKRWLRFSMSSDLPDFHSAYHGDTESGKQRREEEEEEEDGFASQ* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0234 484 FunFam Amino acid permease, putative 19 448 - -
Vvi3g0234 484 Gene3D Amino acid/polyamine transporter I 21 451 - -
Vvi3g0234 484 PANTHER POLYAMINE TRANSPORTER PUT1 17 460 IPR044566 GO:0022857
Vvi3g0234 484 MobiDBLite consensus disorder prediction 458 475 - -
Vvi3g0234 484 MobiDBLite consensus disorder prediction 458 484 - -
Vvi3g0234 484 Pfam Amino acid permease 36 427 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vvi3g0234 484 PIRSF AA_transporter 19 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0234 Vvi-Chr3 2025302 2027513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0234 18 475 Organic Solute Cotransporters AT1G31830 75.764 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0234 - - vvi:100267611 936.406