Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0230 ATGAAGGCTGTTTGGAAGAGGGGATTCATTCGCCTGTTCCTTGTAGGGGGCATTGTGTGGATTTTACTCATCCTCACTGTATTATTATTTCATATCTGGTCTTGCGAATCTTCTTTTGCCTTTTTTTCAGCTATCTGTAACAGAGAAAGCAAAGTATTTGTTGTGTTAGACAATATGGGACTTGTACCAAAGCCACAACATCGTTGTCCAATTCCCATTGCCAACGACCCAGACAAAGTAGTCATTCTACAGGGAAGAACCCCTGACAAAATTGTTCAAAACCTATCCTACATTGTGGAAGATAAGAAAAACGAATTTCAATCACCCCCACTATTTGGTGGCCATCAAAGCTGGCTTCAAAGGGAGAAAAGCTTTAGATTAAAGTCAACCATGAAGGTGCACTGTGGCTTTATGCAAAATGGGGGTGCAGAAATGAACCCGATAGATATCAACTATGCCAAGAAGTGTAGGTTTGTGGTTGCATCTGGCATTTTCGATGGATATGATACCCCTCATGAGCCTTCAGATATAAGCGCCCGTTCTAAAAAGCTCTTCTGTTTTCTTATGGTGATGGATGAGATATCTCTTGATTTCATCAAGAAAAATGTTACTGTTAAAGAGGATGTTGATGGGGGGTTATGGGTGGGTATTTGGCGTCTTGTTCTACTGAAACATCCACCTTATGATGAGCCTAGAAGGAATGGGAAGGTTCCTAAGATATTAACCCACAGGTTGTTTCCTGAGGCACAGTACAGCATTTGGATTGATGGGAAAATGGAGTTGATGGTTGATCCATTACTCATCCTGGAAAGATATTTGTGGCGTGGGAAGCACACCTTTGCCATTGCACAGCACAAGCATCATCACAGTATATATGAGGAGGCTGATGCAATCAAGCGGAGGAAGCGTTATGCACGGCCTCTTATAGATCTCCACATGAAAATATACAGTTATGAGGGTATGAAACCCTGGAGTCCAAAGAAAGGGACTATTAGTGATGTTCCAGAAGGGGCTGTTATCATACGGGAGCACACTGCACTGAATAACTTATTTAGCTGCTTGTGGTTCAACGAGGTCAACCTCTTTACCCCAAGAGACCAGCTGAGCTTTGGCTACGTTGTGTACAGGTTGGGCGGTTTATTCAAGTTCTTTATGTTTCCAAACTGCGAGTACAATTCACTGTTTGTGTTGCACCCACACACACGAGAGCATTCTTCTGTTGTAGAGTGGGTGAAGTCACTTGATGAATTTAAGACAAATAAAACCGGTTTGAAAGAGAGTAGGGGCGGATTGGGGTTATGGACTCCTTATCCTGGAAACCTGGATTCAGTTATCCTACCACCTGTAGCAAGAACATCAAAAGCAGGCTGA 1371 0.4282 MKAVWKRGFIRLFLVGGIVWILLILTVLLFHIWSCESSFAFFSAICNRESKVFVVLDNMGLVPKPQHRCPIPIANDPDKVVILQGRTPDKIVQNLSYIVEDKKNEFQSPPLFGGHQSWLQREKSFRLKSTMKVHCGFMQNGGAEMNPIDINYAKKCRFVVASGIFDGYDTPHEPSDISARSKKLFCFLMVMDEISLDFIKKNVTVKEDVDGGLWVGIWRLVLLKHPPYDEPRRNGKVPKILTHRLFPEAQYSIWIDGKMELMVDPLLILERYLWRGKHTFAIAQHKHHHSIYEEADAIKRRKRYARPLIDLHMKIYSYEGMKPWSPKKGTISDVPEGAVIIREHTALNNLFSCLWFNEVNLFTPRDQLSFGYVVYRLGGLFKFFMFPNCEYNSLFVLHPHTREHSSVVEWVKSLDEFKTNKTGLKESRGGLGLWTPYPGNLDSVILPPVARTSKAG* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0230 456 PANTHER ALKALINE CERAMIDASE-RELATED 17 406 IPR006852 -
Vvi3g0230 456 Pfam Protein of unknown function (DUF616) 95 400 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0230 Vvi-Chr3 1973280 1978301 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0230 - - vvi:100255620 930.243