Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0222 ATGTACCTCTGCTCGTTGACCTGTAGGATATGTAAAGCAGAAAGAACTCTGATGCGAAATGGTGATCGGTCTATTCCAGAAGGAGATAGCTTGAAAGGAAACAACCCTTCTGAGGGCAACAAATGCAATGACACTGCCTCCCAGAAGTCCTGTCAAATAATTGTGGACTGGAGAGAGTTCAGAGCAGCTCTCTTTGCTCGGGAACAGGCAGAAAAGGCAGATCCTGAGGCTCACAGCCAAGGTGGAACACCCCAAGAGCCTAAACCTCTAGGCCTGAAATGGGCCCATCCTTTTCCAGTACCCGAGACTGGCTGTGTCATTGTAGCCACAGAGAAGCTTGATGGGGTACGCTCCTTTGAAAGAACCGTTGTTCTCCTTCTCAGATCTGGAACCAGACACCCACAGCAGGGGCCATTTGGAGTTGTCATTAACCGACCTCTTCACAAAAAGATCAATTACATGAAGCCCACTAATCTGGAGTTGGCAACCACTTTTGCTGATTGTTCCTTGCATTTTGGTGGTCCTGTAGAGGCAAGCATGTTTTTACTAAAAACAGGGGAAAACCCAAAACTTCCTGGTTTTAAAATAATACTTATAATTAAGAATCTCTTTGTCACATCTGAATTGAGTCATGAATATGTCAGATTTCTCAGTTCCAATGAAGTCTAG 669 0.4499 MYLCSLTCRICKAERTLMRNGDRSIPEGDSLKGNNPSEGNKCNDTASQKSCQIIVDWREFRAALFAREQAEKADPEAHSQGGTPQEPKPLGLKWAHPFPVPETGCVIVATEKLDGVRSFERTVVLLLRSGTRHPQQGPFGVVINRPLHKKINYMKPTNLELATTFADCSLHFGGPVEASMFLLKTGENPKLPGFKIILIIKNLFVTSELSHEYVRFLSSNEV* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0222 222 Pfam Uncharacterized ACR, COG1678 118 190 IPR003774 -
Vvi3g0222 222 MobiDBLite consensus disorder prediction 69 88 - -
Vvi3g0222 222 PANTHER TRANSPORTER, PUTATIVE (DUF179)-RELATED 19 207 IPR003774 -
Vvi3g0222 222 MobiDBLite consensus disorder prediction 30 45 - -
Vvi3g0222 222 SUPERFAMILY VC0467-like 102 209 - -
Vvi3g0222 222 MobiDBLite consensus disorder prediction 21 45 - -
Vvi3g0222 222 Gene3D - 102 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0222 Vvi-Chr3 1917760 1921334 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0222 - - vvi:100245246 367.851