Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0221 ATGGTTATGGTTATGGTCCAGAGCAGTGTAAGTAGTGCTTCCTGTGGTGGAACTTTCAGGCGACAATTGGAAAGCATAATTCTTCACAACCATGAAGACACCATGAGCAAGACGGGAGCAATTTTACACTGCGGAATCGTGGCTGCTGGAGAAAGGGATGTTGAAGAACTTGCTTTCTATTCTGCATACTATTTGGCCAAGTACGATGCGTTTGAAATTGGCTTTATAACTACGGACGACTTCACAGATGCAGACATATTGGGAGCAACTTACCCAGCTGTTGCAAAGAGGTTATATAATGATTGGGTTAATGGTCCTGCAATTCCCATTGTTACTGGTTTGCTTGGAAAGGGTTGGAAATCTGGTGCAGTTACTACCTTGAGTAGGGGTGGGAGTGATTTGACAGCCACATCCATTGGTAGAGCCTTAGGCTTGCAAGAGATTCAGTTGAGGATTTTGATCTTGGTTTAA 471 0.4374 MVMVMVQSSVSSASCGGTFRRQLESIILHNHEDTMSKTGAILHCGIVAAGERDVEELAFYSAYYLAKYDAFEIGFITTDDFTDADILGATYPAVAKRLYNDWVNGPAIPIVTGLLGKGWKSGAVTTLSRGGSDLTATSIGRALGLQEIQLRILILV* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0221 156 PANTHER ASPARTATE KINASE 31 149 - -
Vvi3g0221 156 Gene3D - 13 151 IPR036393 -
Vvi3g0221 156 SUPERFAMILY Carbamate kinase-like 60 147 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0221 Vvi-Chr3 1915764 1917733 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0221 K00928 - vvi:100267777 142.51