Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0220 ATGCAACATTGGAACGGGGCCACACTAGCACATTCAATCGTGGAGGACAAGATGCATCTATATCGATTGAGTTATGAAATACTGAAGGTTGCCTATAAAAGACAATGTCAAAGAGAAGCGAAAGACAACGTGTCTGTATATAATCATGGTTTGCTTTATTTGTTTGTTAATAGTGTCTGCCACAGTGCACCATTTTATGGTAATAAAATCATGCACACTGGGACAACAGTGGAAACATTTGTCATGGAGAATCTGGAAAGGCTGGGTAGAGCCACAAATTGGCCTATGTTAAGTACAACAGCAAGTCTAGGTGTGATTAATAGAGGCCACCTGCAACAGGGAAGGTCACTGATGGCACCTTACTTGCCTCAGAGTGGGGCTGGTGGTGGCGGCAGTCGATAA 402 0.4353 MQHWNGATLAHSIVEDKMHLYRLSYEILKVAYKRQCQREAKDNVSVYNHGLLYLFVNSVCHSAPFYGNKIMHTGTTVETFVMENLERLGRATNWPMLSTTASLGVINRGHLQQGRSLMAPYLPQSGAGGGGSR* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0220 133 Gene3D - 49 132 IPR011989 -
Vvi3g0220 133 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 57 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0220 Vvi-Chr3 1914965 1915650 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0220 K03032 - csin:114295075 127.102