Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0215 ATGGGATGTGTTGCCTCCAAGCTAGAGGAAGAAGAAGTGGTATCTATTTGCAGAGAGAGAAAAAGGTTCTTGAAGTTAGCTGTGGAGAGAAGATACGTTCTCGCAGATGCACATTGTAGGTACTATCAAGCCCTCTATGCAGTAGCAGCAGCCATAAAACTTTTTGAAGCTCGCCATTCTTCCCCTTCTTCACCATTTCTCATCACCTTCCCTCCACCTAGTCCACCATCTCCTCCCATCCAAAATGTTATCTCCAACCCAATGTTCCTCCAACAGGAGCCATCTGAGTCAACCCAAGAAGCCATTGCTTGTGATTCAGTTGATTCTTCAACACCCTCAGACTCTTCTGAAGAAGAAGAAGAAGAAGAAGAAGAGAAACAGCAGGACACAAAGAGAGAAGAACAAGTTTGTGGGTACTTTTATATGCAAATGTCACCTTCAACGCCATCACCACAGAAAGAGTTTGGGTGGGATTTCTTCAATCCATTTGATGGGGTAAGACCAGAGGAGGAGCAGAAGGGGCTTACAGTTATCGATACCCCGGCCCGGGGAAGGGAACTGTTGGATGCATTGAAGGATATTGAGGACCATTTCATTAGGGCTTATGATTCTGGTAAGGATGTCTCCAGGATGCTAGAGGCCAGTAGAGTTCATATGCTCTCTGGGAACTCGACAAAACTCATCCAAGCTATCACATGGCACCGTAGCTCATCACGGTCTTCATCCTGTAAGAGTCTTGTGGCATCCAGCTCCAAGAGCTCTTCAACATGGACAGAATATAAGAATGATCTTTTCGATGATTGTGGAGGAATGAACTCAGGGAGCCATTCATTAACACTGGGAAGGCTGTATGCTTGGGAAAAGAAGCTCTATGATGAGGTTAAGGCTGGAGACAGTACTCGGAAAATTTACGAGAGGAAGTGTTCACAACTGAGAAACAAGGATGTGAGAGGAGATGATGAACTTTCTGTGGACAAAACCAGAGCTGCAGTGAAGGATTTATATGCCAGAATCTTGGTTGCAATAAGGAGTGCTGAGTCGATCTCAAAAAGAATTCAGAAACTGAGGGATGAAGAACTGCAGCCCCAGATAATGGAGCTGTTAAAAGGCCTAATGCAAACCTGGAAGATAATGTTGGAATCCCATCAAACCCAGAACCAGATTCTGTTTGAAGTGAAGTCTTTTACCTGCCCATCGTATGGGAAATTCTGCAATGAGTCTCACCGGCTTGCAACTCTTCAGTTGGAGGCTGAGCTTCTGAATTGGCGTGCATGCTTCGGGGAGTATATTATGGCACAAAAAGCGTATATTGAAGCTCTCCATGGATGGCTCTCCAAGTTTGTAGTCCCTGAGGTTGAATTCTGCTCACGAGGCAGACGCTCAGCTCCGCCATGCCCAGCCAATGGGCCACCGCTGCTCATAACCTGCCATGATTGGCTATCTTCCTTACAGAAGTTGCCAGACGAGACTGTTTCCCGAGCCATGAAAAGCTTTGGGAAGGATATAAAAGCTTTGTGGGTTCATCAAGGGGAGGAACAGCAACAGAAGAGGAAGGTGGATGGTCTTGCGAAAGAGCTTGACAGGAGGATTCTAGCCTTCCAGAAGGCAGAGAACAGAGTCCTCGAGTTCAAGCTTTCAGAACAGAAACCTGAGCCAGACGGGCAGCATCAAGATGAGTACTTGACAGAGAAGAGGGATCTCCTGGACATGTTCAGAAGGAAGCTGGATGTAGAGAAGGAAAAACACCATAATTGCATGCAAGAAACACAAAGAGTCACATTGAATGGGATTCAGACTGGGTTTTCTTCGGTTTTCGAGTCCTTGACAGAGTTCTGCAAGGCTTCTCTGAAAATGTATAATGACCTTGTGAACTACAGTGAGAGTGCTGAAAAAGCTGGGAACCCATCATACATAGAGGGAGGATCCCAGGTTGAAGAAGAGGATGGAAGCAGGTAA 1956 0.4601 MGCVASKLEEEEVVSICRERKRFLKLAVERRYVLADAHCRYYQALYAVAAAIKLFEARHSSPSSPFLITFPPPSPPSPPIQNVISNPMFLQQEPSESTQEAIACDSVDSSTPSDSSEEEEEEEEEKQQDTKREEQVCGYFYMQMSPSTPSPQKEFGWDFFNPFDGVRPEEEQKGLTVIDTPARGRELLDALKDIEDHFIRAYDSGKDVSRMLEASRVHMLSGNSTKLIQAITWHRSSSRSSSCKSLVASSSKSSSTWTEYKNDLFDDCGGMNSGSHSLTLGRLYAWEKKLYDEVKAGDSTRKIYERKCSQLRNKDVRGDDELSVDKTRAAVKDLYARILVAIRSAESISKRIQKLRDEELQPQIMELLKGLMQTWKIMLESHQTQNQILFEVKSFTCPSYGKFCNESHRLATLQLEAELLNWRACFGEYIMAQKAYIEALHGWLSKFVVPEVEFCSRGRRSAPPCPANGPPLLITCHDWLSSLQKLPDETVSRAMKSFGKDIKALWVHQGEEQQQKRKVDGLAKELDRRILAFQKAENRVLEFKLSEQKPEPDGQHQDEYLTEKRDLLDMFRRKLDVEKEKHHNCMQETQRVTLNGIQTGFSSVFESLTEFCKASLKMYNDLVNYSESAEKAGNPSYIEGGSQVEEEDGSR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0215 651 MobiDBLite consensus disorder prediction 92 132 - -
Vvi3g0215 651 MobiDBLite consensus disorder prediction 630 651 - -
Vvi3g0215 651 PANTHER UNCHARACTERIZED 1 626 - -
Vvi3g0215 651 Coils Coil 113 136 - -
Vvi3g0215 651 MobiDBLite consensus disorder prediction 112 127 - -
Vvi3g0215 651 MobiDBLite consensus disorder prediction 92 111 - -
Vvi3g0215 651 Pfam Protein of unknown function (DUF632) 187 503 IPR006867 -
Vvi3g0215 651 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0215 Vvi-Chr3 1886320 1890421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0215 1 86 Acyl Lipid Metabolism Gene Families AT2G27090 33.333 7.70e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0215 - - vvi:100243514 935.636