Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0213 ATGTCGTTTTGGCACAGAATCAACCAACCAAAGCTGAAATGGCAAACCCTAACACGCCAATTCAAGCGGTGTTCCCTCCAAATTCCTCATGCTCATTCGCTGAATAACACTCCTCGTCAAACAATTCGAGGGTTTGAGAATCCATGTTGGGTTAATCGTAGAAACCCATCCGATTTTTGTTACAATGTTAGGTTTTTCGCAGCCCCGGTTCAGGCCAAGCCGAAGCAGGAAGAGAAGGACGCAAGCGGGCCTCGAATGAATGACCAAATCAGGGCTGATTTTGTTCGGCTTGTGACCGATGATGGGCATGAGATTGTCTCAAGGATGGTAGCACTGGAGCGAGCAAGGAAACTCAAGCTTGATTTAGTTGAGGTTCAACGAAAGGCTGATCCACCTGTTTGTAAAATCATGGACTTCCATAGAGAAAAGTACAAACAGCAAATAAAGGAAAAGGACCGTACAAAAAGCAAGTCTGAGTTGACTTTACGGAAAGGAGATTGCAAGGAAGTTCGATTTTCTGGGAAAACTGAAGCAAAAGACCTTAAGATGAAAGCTGATATGGTTAAGAGACTGATGGATCGTGGTTATCGAGTGAAGTGTATGGCCATGGGTACTGAAGATCAAGACTTGGGGGGATTGTTAACTCGTCTGTCTAGTTTGATTGAAGATGTTTGTTTTGTGGAAAGTGGACCAAGGGTAGAGAAAAGACAGGCATATGTAATAGTTAGGCATATCAAGTTTGGTCCATCAAAGAAAGGCTCTGGAAAAAAGGCTTCCAAGGTTGTTGGTGTTACAAGCTCTGAGGCTGCTACTATGTCCCCAACCATCAGCCCAACCATTAATCCTTCTAGTCATGTTGAAAGCCCCATACAGCTTGAAGTAGAATCAGACACGGCAGAATCTGATCTGGAAAATGAGGATGAGGTCCTTTCTGATGAAGCAGACACACCTATATCCCCTTCTATGAGAATGGCAGATAAAAATCTTGAAGATAACAAAGCTACTTGGTCAGTTTTTGATGCGAATGATGACTTTGACAAAGTATTTGATTTTACCAATGATGCAAACCCTTCAAATTCTACTGATAAACAAACGAATGCTAAGCTAGAAACATCCTCCTCTCTTGAAAATATTAATCTCTCTGACATTATGCATGGCCCCAGACCAGTCCTTGATTCTACCAGAACGAACTCGGTTCCATCCTCCCTAACTGAGCCTCCACCTGAAACTCTGAATAGGTACAGAAAAAGTGAACCAAGGAACAGGTTTATGCCAACAACATCCATGGATAATAAGGGCCCGGGTGCAACAAACTCACTGAGGTTAGGACCCCAGTTTCTAAACCAAGGAAAGCAAGCACGATCTGATACGAATTCCTCACCTTCAACAGGAAGAACAAGGCAGGATGGAACTGATGCTTCTGTGTTCAGAAACTTGAAGCTTCCACTGCATGAGATTCCCATGCAAGAACCATCTCGGCCTCCTAGCTCTCCACGACCTAGTTACGGGGACTTTAGTGCCCTAAAAGCTGAAGCTCCTGGGAAGCTAGATCCATCTGCAAACTCAGCAAGGTCAGAACCTCGGTTACCAAATCAAGGAAAGCAGTCATGGTCTGATTTAAATTTCGTGCCCTCAACAGGGGGAACTAAGCAAGTTCCAGCTGATACTTCTGTATCCAGAAACTCGAAGCCTCCCACAAATGATGGTCCCAAGCCAGAACAGTCTCATCCTGTGCCTCCAAGCTCCCCGACATCAAGTTACGGGATTTTCAGTGCTTCAAAAGCTACTGCTCCTGGGAAACAAGGCATGGCATCAGAAGTTAACAGGAACAAAGAAGGAAACCCATCTGAATCTGCAAGAAATCCCAGTGCGGGAGGCGTCTTCAATGCGAACTTCCCATCAAAATCCGATGGCAGCCAGAGAGGAGGTGTCAATCAGGATGGACAAGGAGGATGGGGAATGTTCAGTAGAGAGGGCTCAAAAGTCATCCCAAGCAGGACTTCTGAAAGTGAAGCAAAGGTGCAAAGATGA 2031 0.4495 MSFWHRINQPKLKWQTLTRQFKRCSLQIPHAHSLNNTPRQTIRGFENPCWVNRRNPSDFCYNVRFFAAPVQAKPKQEEKDASGPRMNDQIRADFVRLVTDDGHEIVSRMVALERARKLKLDLVEVQRKADPPVCKIMDFHREKYKQQIKEKDRTKSKSELTLRKGDCKEVRFSGKTEAKDLKMKADMVKRLMDRGYRVKCMAMGTEDQDLGGLLTRLSSLIEDVCFVESGPRVEKRQAYVIVRHIKFGPSKKGSGKKASKVVGVTSSEAATMSPTISPTINPSSHVESPIQLEVESDTAESDLENEDEVLSDEADTPISPSMRMADKNLEDNKATWSVFDANDDFDKVFDFTNDANPSNSTDKQTNAKLETSSSLENINLSDIMHGPRPVLDSTRTNSVPSSLTEPPPETLNRYRKSEPRNRFMPTTSMDNKGPGATNSLRLGPQFLNQGKQARSDTNSSPSTGRTRQDGTDASVFRNLKLPLHEIPMQEPSRPPSSPRPSYGDFSALKAEAPGKLDPSANSARSEPRLPNQGKQSWSDLNFVPSTGGTKQVPADTSVSRNSKPPTNDGPKPEQSHPVPPSSPTSSYGIFSASKATAPGKQGMASEVNRNKEGNPSESARNPSAGGVFNANFPSKSDGSQRGGVNQDGQGGWGMFSREGSKVIPSRTSESEAKVQR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0213 676 Gene3D - 162 248 IPR036788 GO:0006413
Vvi3g0213 676 MobiDBLite consensus disorder prediction 441 473 - -
Vvi3g0213 676 PANTHER TRANSLATION INITIATION FACTOR IF-3 6 275 IPR001288 GO:0003743|GO:0006413
Vvi3g0213 676 MobiDBLite consensus disorder prediction 294 323 - -
Vvi3g0213 676 MobiDBLite consensus disorder prediction 661 676 - -
Vvi3g0213 676 FunFam Predicted protein 77 152 - -
Vvi3g0213 676 SUPERFAMILY Translation initiation factor IF3, N-terminal domain 83 155 IPR036787 GO:0003743|GO:0006413
Vvi3g0213 676 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 167 246 IPR036788 GO:0006413
Vvi3g0213 676 Gene3D - 77 152 IPR036787 GO:0003743|GO:0006413
Vvi3g0213 676 NCBIfam translation initiation factor IF-3 84 242 IPR001288 GO:0003743|GO:0006413
Vvi3g0213 676 MobiDBLite consensus disorder prediction 607 646 - -
Vvi3g0213 676 FunFam Translation initiation factor 3 (IF-3) family protein 163 253 - -
Vvi3g0213 676 Pfam Translation initiation factor IF-3, N-terminal domain 86 152 IPR019814 GO:0003743|GO:0006413
Vvi3g0213 676 MobiDBLite consensus disorder prediction 421 435 - -
Vvi3g0213 676 MobiDBLite consensus disorder prediction 354 676 - -
Vvi3g0213 676 MobiDBLite consensus disorder prediction 297 313 - -
Vvi3g0213 676 MobiDBLite consensus disorder prediction 391 408 - -
Vvi3g0213 676 MobiDBLite consensus disorder prediction 354 380 - -
Vvi3g0213 676 MobiDBLite consensus disorder prediction 524 569 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0213 K02520 - vvi:100248653 1307.35