Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0210 ATGGATGCAGTTGAAGACATAGTGATTGTGGGAGCTGGAATTGCAGGCCTTACCACTGCCTTGGGACTCCACAGGCTGGGTTTGCGAAGCTTAGTGCTGGAATCATCGCATAGTTTGAGAGTGACTGGGTTTGCATTCATTACATGGACCAATGCGTGGAGGGCTTTGGATGCTATAGGCGTTGGAGACTATCTCCGTCAACATCATAACCAGCTTTATGGGTTGCAGTCTGCCTCTACAGTATCAGGTCTTCAAACTTCAGAAATATCATTTAAGGCCAAAGGAAAAAATGGAGAGCATGATATTCGGTGTCTTCAAAGGAAGGTGCTATTAGAAGCCCTTCTAAAAGAACTGCCAAATGGCACAATCAGGTATTCCTCCAAGGTTGTTTCTGTTGAGGAATCAGGCTACTTGAAGCTGGTGCATCTTGCTGATGGATCCATTCTTAAAACCAAGACACTATTTGTAACAATACTTGAATTGGAAGGTGTTGATCGGATGCGATGGAGTGAACTCAATGGTGGCAAAATGGCTGGCTTGAAGAAGCCAGCTTTTACAAGGCGATATGCCTTTCGAGCCTATGCATATTTCAAGAGTGGTCATGGTTTTGAGCCCAAATTCCTGCAGTTCTTTGGGAAAGGTGTTCGATCTGGTTTTATCCCTTGTGATGATAAGACTGTGTATTGGTTTATGGCCTTTACACCTTCCAGCCAAGAAAAACAGATGGAAAATGACCCAGCTAAGATGAAGCAATTCGCATTGAGCAATCTGGGAAACGTACCTGATCAAGTAAAGGCAGTTGTAGAAAGCACTGAAATGGATTCTATTTCATTAGCTCAAATGAGATTCAGATATCCATGGGAGCTTCTATGGGGGAATATCAGCAAAGACAATGTTTGTGTGGCTGGGGATGCACTCCACCCCATGACACCAGATCTTGGGCAAGGTGCGTGTTCAGCCTTAGAAGACACTGTTGTCTTAGCCAGGTGTCTTGCTGAAGCATTGTCAAAGAAACCAAAAAACAAAGCTGAAGAAAAAGAAGAGGAGGAATTCAAGAGGATCAAAATGGGGTTGGAGAAATACGCTAAGGAGAGGAGATACAGAGGCATTGATCTCATCACATCTTCTTACCTGGTGGGTTTTATACAGCAGAGTGATGGGAAGATGTTGAACTTCATCAGGGATAAAATCTCTGCACTCCTTGCTGGGGTACCGTTAAAGAAGGCTGATTTTGATTGTGGGAAGCTCAGCATGTCTTGA 1260 0.4397 MDAVEDIVIVGAGIAGLTTALGLHRLGLRSLVLESSHSLRVTGFAFITWTNAWRALDAIGVGDYLRQHHNQLYGLQSASTVSGLQTSEISFKAKGKNGEHDIRCLQRKVLLEALLKELPNGTIRYSSKVVSVEESGYLKLVHLADGSILKTKTLFVTILELEGVDRMRWSELNGGKMAGLKKPAFTRRYAFRAYAYFKSGHGFEPKFLQFFGKGVRSGFIPCDDKTVYWFMAFTPSSQEKQMENDPAKMKQFALSNLGNVPDQVKAVVESTEMDSISLAQMRFRYPWELLWGNISKDNVCVAGDALHPMTPDLGQGACSALEDTVVLARCLAEALSKKPKNKAEEKEEEEFKRIKMGLEKYAKERRYRGIDLITSSYLVGFIQQSDGKMLNFIRDKISALLAGVPLKKADFDCGKLSMS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0210 419 Gene3D - 6 395 IPR036188 -
Vvi3g0210 419 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 311 327 - -
Vvi3g0210 419 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 - -
Vvi3g0210 419 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 311 - -
Vvi3g0210 419 Pfam Lycopene cyclase protein 6 155 - -
Vvi3g0210 419 SUPERFAMILY FAD/NAD(P)-binding domain 6 405 IPR036188 -
Vvi3g0210 419 Pfam FAD binding domain 218 342 IPR002938 GO:0071949
Vvi3g0210 419 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 5 417 IPR044560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0210 Vvi-Chr3 1816268 1822049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0210 2 417 Miscellaneous Gene Families AT5G05320 50.120 5.79e-149 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0210 - - pvy:116124457 526.554