Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0207 ATGATCGTGTGCGTCGCGGTGGTCGGACACCAGAACAACCCTCTCTACATCCAGAGCTTCACCGAGGCCGATGATGCCCTCAAGCTTCACCACATCGTCCACTGCTCCTTGGACGTCGTTGACGAGCGAGTGAACAATCCGAAAAAATCTGGACCAACCCTGAATGAAACATTTCTTGGTCTGCTTTATCCAACCGAAAATTACAAAGTATATGGTTATTTGACTAATACAAAGGTGAAGTTTATCTTGGTTACAACAGATTTAGATGTCAGGGATGCAGATGTCAGAAATTTCTTCAGGAGGTTCCACTCTGCATACGTGGATGCGGTTTCAAATCCATTCCACGTTCCAGGTAAAAAAATAACCTCCAGAACTTTTGCAGAAAGGGTCAGTACCATTGTCAAGTCATTTGGTTTGAGTTCAGCTGGATGA 432 0.4468 MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHSAYVDAVSNPFHVPGKKITSRTFAERVSTIVKSFGLSSAG* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0207 143 CDD TRAPPC2L 3 134 IPR044760 GO:0006888
Vvi3g0207 143 SMART Sybindin_2 17 137 IPR007233 GO:0016192|GO:0030008
Vvi3g0207 143 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 1 137 IPR006722 GO:0006888
Vvi3g0207 143 SUPERFAMILY SNARE-like 2 137 IPR011012 -
Vvi3g0207 143 Gene3D - 1 141 - -
Vvi3g0207 143 Pfam Sedlin, N-terminal conserved region 7 135 IPR006722 GO:0006888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0207 K20301 - vvi:100241847 291.582