Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0196 ATGGAGCGGTTGATTTACTCGTATTCTCCAATCCCCTCCAAAGTCCGTCTAAAGCCCTTTTCTCCTCTCTCTCCTATCCCTTCACTTCCTCCATTCGACTCCTCAAGACTCTGTTTTTCTTCCTTCTCATGCACCCATCTCAAGCGCCTCAACGCCTCAACGCCCCATTCTTCTTTTCTCTGTTCTTTAGCGCCCTTGCTTGCATCATCCTCGTCTTCCTCGGCTTTCCAGGCTGAGTCACCCGACGAGTCGGTTTCCCCACCCAGTTCTCTCCCACAGATCGTAGCAGGAGCTTCCCAGCAGCGAAAGGCAGCAACTGCTGGGACAATAACACTACTCTCAGCTCTTACCATTCTCTTAATCCACCCAGTTCTTGCACAACCAGCTTTTGCAACTTTCCAAACTGCAGCCAAGACTGGGGGTCCAGCTGCTGCTACTGTAGGGGGACAACTCATCCGGACTGAATTACTAAGTAGTGCTTGGACTGGTTTCTTTGCTGGCTGCTTACACACACTATCAGGGCCTGATCACCTTGCTGCTTTGGCTCCACTCTCAGTTGGCCGTAGCCGCATGGAAAGTGCTGCAGTTGGAGCCCTTTGGGGCTGTGGCCATGATGCTGGTCAGATGATCTTTGGCCTGCTCTTTCTGCTGCTAAAGGACCGCCTCCACATTGAAGTCATCCGAACTTGGGGCACCAGAGTGGTTGGATTTACTCTACTTGTTATTGGAGCCATGGGAATCAGGGAGGCCTCAGAAGTCCCTACTCCATGCGTGGCCGTGGAGAATGGTGAGTGTGATGTTGGTACCTATGAGGCGCTAGAAAACCCTACAGCTAAGAAAAAGAAGATTGGATTTGCAACTTTCGCCACAGGGATCGTCCACGGCCTGCAACCTGATGCACTGATGATGGTCTTGCCTGCACTTGCATTGCCTTCTCGCTTGGCCGGTGCTGCATTTCTGGTAATGTTCTTACTAGGGACTGTAGTTGCAATGGCTAGCTATACTGTATTCATAGGCTCATGTAGTCAGGCTCTAAAAGAAAGGGTCCCTAGAATAACTGAGAAACTCACTTGGGCTTCTTCCCTTATAGCAATTGCTCTTGGATTTGCCATTCTCATTAGCCAGTTTTTCGGGTTTAGCTTGTACTGA 1149 0.503 MERLIYSYSPIPSKVRLKPFSPLSPIPSLPPFDSSRLCFSSFSCTHLKRLNASTPHSSFLCSLAPLLASSSSSSAFQAESPDESVSPPSSLPQIVAGASQQRKAATAGTITLLSALTILLIHPVLAQPAFATFQTAAKTGGPAAATVGGQLIRTELLSSAWTGFFAGCLHTLSGPDHLAALAPLSVGRSRMESAAVGALWGCGHDAGQMIFGLLFLLLKDRLHIEVIRTWGTRVVGFTLLVIGAMGIREASEVPTPCVAVENGECDVGTYEALENPTAKKKKIGFATFATGIVHGLQPDALMMVLPALALPSRLAGAAFLVMFLLGTVVAMASYTVFIGSCSQALKERVPRITEKLTWASSLIAIALGFAILISQFFGFSLY* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0196 382 PANTHER UNNAMED PRODUCT 105 382 - -
Vvi3g0196 382 Pfam Cytochrome C biogenesis protein transmembrane region 210 354 IPR039447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0196 Vvi-Chr3 1722365 1725599 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0196 - - vvi:100250325 624.78