Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0193 ATGTACTATGGACGGCCCAGATCAGAACAAATAGCTCTATATAATGCAAGGGAGGAGGCAACGAAGTGTGTATATCAGACTCAACGTTTTCACTCTTTTGAGACGAAGCAAAGGCCTCTCGTTGGAAATTCTATTTGGGTTTCTTCCCTTTTCTTTTACATTTGTGTGGAATCCTTTTCGGGTTTCGTGATGGGTGCTTTGGATCATGTTTCTCATCTCTTCGACTGCTCTCATGGCAGTTCCAAGCTGAAGAGACGCAAGCAGCTTCAGACGGTGGAGATCAAGGTGAAGATGGACTGCGAAGGGTGTGAGCGGAAGGTGCGGAGAGCAGTAGAGGGAATGAAGGGTGTGACGCAGGTGGACGTGGTGCCGAAGCATCACAAGCTTACAGTTGTCGGGTACGTGGACCCCGCTAAGGTGGTGTCACGTGTCGCACATCGGACTGGCAAGAAGGCAGAGCTGTGGCCCTACGTGCCATACGACGTGGTGGCGCACCCTTACGCTCCTGGGGTGTACGACAAGAAGGCACCACCTGGGTATGTGCGAAACGCGTACGAGGACCCTCAGTATTCGCATCTGGCACGTGCGAGCTCCACTGAGGTGCGGTACACCACAGCCTTCAGTGATGAGAATCCAGCCGCTTGCGCTATCATGTGA 657 0.5266 MYYGRPRSEQIALYNAREEATKCVYQTQRFHSFETKQRPLVGNSIWVSSLFFYICVESFSGFVMGALDHVSHLFDCSHGSSKLKRRKQLQTVEIKVKMDCEGCERKVRRAVEGMKGVTQVDVVPKHHKLTVVGYVDPAKVVSRVAHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPPGYVRNAYEDPQYSHLARASSTEVRYTTAFSDENPAACAIM* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0193 218 Pfam Heavy-metal-associated domain 95 149 IPR006121 GO:0046872
Vvi3g0193 218 ProSiteProfiles Heavy-metal-associated domain profile. 89 153 IPR006121 GO:0046872
Vvi3g0193 218 FunFam Heavy metal-associated isoprenylated plant protein 26 77 155 - -
Vvi3g0193 218 Gene3D - 86 153 - -
Vvi3g0193 218 CDD HMA 93 153 IPR006121 GO:0046872
Vvi3g0193 218 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 91 215 IPR045181 GO:0046872
Vvi3g0193 218 SUPERFAMILY HMA, heavy metal-associated domain 89 156 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0193 Vvi-Chr3 1691849 1693057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0193 - - vvi:100260571 323.168