Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0165 ATGGCTTCTGATAAGGTGGTGGAGACAGTGATGGTGGGGAATTATGTGGAGATGGAGACTGAAGGCAAGCCCCAGGATGTGAAGACAAGGCTGTCCAAGTTCTTCTGGCATGGTGGCTCTGTGTATGATGCCTGGTTTAGCTGTGCTTCAAACCAGGTGGCTCAGGTTCTGCTGACTTTGCCATACTCATTTTCCCAGCTGGGGATGCTGTCTGGGATTCTATTCCAGCTGTTCTATGGCTTGATGGGAAGCTGGACAGCCTATCTCATCAGCATCCTCTATGTGGAATACAGAACCAGAAAGGAAAGAGAGAAAGCTGATTTCAGAAACCATGTCATTCAGTGGTTTGAAGTTCTTGATGGGCTGCTTGGCAAACACTGGAGGAACGTGGGGTTGGCTTTCAACTGCACTTTTCTTCTGTTTGGATCCGTGATTCAACTCATAGCTTGTGCCAGCAACATATATTACATAAATGATAATCTGGACAAGAGGACATGGACTTACATCTTCGGAGCCTGCTGTGCCACCACAGTCTTTATTCCTTCATTCCACAACTACAGAATCTGGTCCTTCTTGGGCTTGATCATGACCACTTACACTGCCTGGTACCTCACTGTTGCATCCCTCCTCCATGGCCAGATGGAAGGAGTGAAACACTCAGGTCCATCCAAGCTGGTGCTATACTTCACAGGGGCTACAAACATTCTCTACACATTCGGGGGACATGCTGTGACTGTAGAGATAATGCATGCAATGTGGAAACCACAGAAATTCAAGGCCATATACCTGCTGGCTACCGTGTATGTGCTGACACTGACACTTCCGTCCGCGGCAGCAGTCTATTGGGCATTTGGTGATGCACTTCTCAGTCACTCCAACGCCTTTGCCCTCCTTCCCAGATCACACTTCAGGGACATGGCTGTCGTGCTGATGCTCATCCACCAGTTCATCACCTTTGGATTCGCATGCACACCTCTGTACTTCGTGTGGGAGAAAGCGATAGGGATGCACGAGTGCAAGAGCCTTTGCAAGCGTGCGGCGGCGAGATTGCCTGTGGTCGTCCCCATCTGGTTTCTTGCCATCATCTTCCCTTTCTTTGGGCCCATCAACTCCACCGTCGGATCTCTCCTTGTGAGTTTCACTGTCTATATCATCCCCGCTCTGGCCCACATCTTCACCTTCAAATCAGCGGCTGCCCGTGAGAACGCAGTGGAGCAACCACCAAAGTACTTGGGAAGATGGGCTGGTGCCTATACAATCAACATCTTTGTGGTGGTTTGGGTGTTTGTGGTTGGTTTTGGGTTTGGTGGGTGGGCCAGTATGATCAATTTTGTACACCAGATTGACACTTTTGGGCTCTTCACCAAGTGTTACCAGTGCCCACCATCATCACCACCGCAACACCCTCTCAACACCACCAGCGCCTCCGTCTCTCCACCGCCTCCTCTCCACCATCTCCACCACCACTGA 1470 0.5041 MASDKVVETVMVGNYVEMETEGKPQDVKTRLSKFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKADFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTTYTAWYLTVASLLHGQMEGVKHSGPSKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATVYVLTLTLPSAAAVYWAFGDALLSHSNAFALLPRSHFRDMAVVLMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVVPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSAAARENAVEQPPKYLGRWAGAYTINIFVVVWVFVVGFGFGGWASMINFVHQIDTFGLFTKCYQCPPSSPPQHPLNTTSASVSPPPPLHHLHHH* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0165 489 PANTHER OS05G0424000 PROTEIN-RELATED 43 426 - -
Vvi3g0165 489 MobiDBLite consensus disorder prediction 465 489 - -
Vvi3g0165 489 Pfam Transmembrane amino acid transporter protein 37 408 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0165 Vvi-Chr3 1472790 1476160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0165 4 460 Organic Solute Cotransporters AT2G21050 89.934 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0165 K13946 - vvi:100253820 967.222