Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0161 ATGGGTGGCAAGAAGAGGAGGAGAGTGGAGCGGCCGTCGATACATCCCAGAAACAAGTACTCCGAAAACCCGCCCGATTTCGCCCTCTTGGCTTCCCTCTACCCATCCTTCAAGCCCTTCGTTTTCTTGAACCGCGCTGGTCGACCCACAATCGATTGGACCGATTTCAACGCCACCCGAGAGCTGACCCGAGTGCTTCTCCTCCACGACCATGGCCTAAATTGGTGGATTCCTGATGGGCAGCTTTGCCCTACAGTTCCAAACAGATCAAACTATATCCATTGGATTGAAGATCTTCTGTCTTCTGACATTATTCCTAAGACAAGCACTGATGGAAATAATGTGAGGGGTTTTGACATTGGAACTGGAGCCAATTGCATTTACCCACTTCTTGGTGCATCTCTTTTGGGATGGAGCTTTGTTGGGACAGATGTGACAGATGTAGCGCTGGAGTGGGCAGAGAAGAATGTTAAAAGTAATCCGCATATTTCAGAATTAATTGAAATTAGAAAGGTTGAAAGTGATGGCAGCACCCCTTCTGGGGAGGGGTTGCATATTGGTGAGTCATTCATTGTTGAAGGTGAAAAAGATTTAAGTGGAATTAATGCGGGGGACACAGAGCCTTTGCCCTCATGTTCACTTGATGCAGATTTGGGTTCAAATAAAAGTTATCATGGGCCTCCTGTGCTCCTTGGCATCCTGAAGGATGGTGAGAATCTTGACTTCTGTATGTGTAATCCTCCATTTTTTGAGACCATGGAGGAAGCAGGACTTAACCCAAAAACTTCATGTGGGGGGACCCCAGAGGAGATGGTTTGCCCTGGAGGAGAGAAGGCTTTTATAACACGTATCATTGACGATAGTGTGATTTTGAAGCAATCTTTTCGGTGGTACACTTCGATGGTTGGGAAGAAAACAAACCTGAAGATCCTTGTATCAAAGCTTCGGAATGTTGGAGTGACCATAGTTAAGACAACTGAATTTGTCCAAGGCCAAACATGTCGTTGGGGGATTGCTTGGTCTTTTGTGCCTTCTGCCAGGAAGTTGATATTGCCTCATGTAGCCAAGAAGAACAATCAGTCTTTCATGCTTGAGGGTCTTCAACGCCAATTTAGTGCCATAAATGTGCTACAATCAGTTGAGTCCTTTTTCTGCACTATCGGTGCATCCTGTAAATCCAATGCTTCCTCGTTTACAGTTGATGTTGCTATATCAAATGATCACTGTAATGCAATCCTGAAGACTGAAGTGCAAGGTTACAATGAACTCAACAATTACCAGTATATGCAAGAGATTTGCGATGGTTCAAGTTTCCCCCCTTCGTTTGAAGAACTATGCTTCCGCATTTTGGTATACCTCCTTGTTGGCTTGAATACAATGCCTTCTATTGTTAGAAACCTAAAACTTACATTGATTGTATCATCTGTTCCCCTTTTTGTTCTTTAG 1446 0.4433 MGGKKRRRVERPSIHPRNKYSENPPDFALLASLYPSFKPFVFLNRAGRPTIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSDIIPKTSTDGNNVRGFDIGTGANCIYPLLGASLLGWSFVGTDVTDVALEWAEKNVKSNPHISELIEIRKVESDGSTPSGEGLHIGESFIVEGEKDLSGINAGDTEPLPSCSLDADLGSNKSYHGPPVLLGILKDGENLDFCMCNPPFFETMEEAGLNPKTSCGGTPEEMVCPGGEKAFITRIIDDSVILKQSFRWYTSMVGKKTNLKILVSKLRNVGVTIVKTTEFVQGQTCRWGIAWSFVPSARKLILPHVAKKNNQSFMLEGLQRQFSAINVLQSVESFFCTIGASCKSNASSFTVDVAISNDHCNAILKTEVQGYNELNNYQYMQEICDGSSFPPSFEELCFRILVYLLVGLNTMPSIVRNLKLTLIVSSVPLFVL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0161 481 Gene3D Vaccinia Virus protein VP39 45 343 IPR029063 -
Vvi3g0161 481 Pfam RNA methyltransferase 11 174 IPR010286 GO:0008168
Vvi3g0161 481 Pfam RNA methyltransferase 229 343 IPR010286 GO:0008168
Vvi3g0161 481 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 52 342 IPR029063 -
Vvi3g0161 481 MobiDBLite consensus disorder prediction 1 20 - -
Vvi3g0161 481 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 14 455 IPR010286 GO:0008168
Vvi3g0161 481 PIRSF Mtase_ZK1128 2 440 IPR017182 GO:0008168
Vvi3g0161 481 FunFam U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase 45 343 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0161 K11393 - vvi:100247029 934.48