Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0153 ATGCACTCCTCCAAGCCGACAAGGCTGACAGGGACAGGAAGGCTAAGCGTGGTGAGGAAGTTGAGGAAGGTTGGGGCTATCATACTGGGAAAGGCTAGCCTGAGTGAGTGGGCTGGTTCACGCTTTGCTACTCCTTATGGCTGGTGTGCCAGAGCTGGCCAAGGTCGGAACCCTTATGTTCTGTCAGAAACTCCTTGTGGCTCAAGTAGTGGATCAGCTATATCAGTAGCAGCAAATTTGGCAGCAGTGTCTCTAGGGACGGAGACTGATGGATCCATCTTATATCCATCCCACATTAATTCACTGGTGTGGTTCCAATCTCTCCTAGGCAGGACACTGTTGGGGCAAGGAGGTGCTATTTTGGTAGACCACCTGGAAATAGCCAACATTGATGTTATATTTGGCTCCTCCAGAGAAGAAGCAACATTAGAGGCGGAGTTCAAAATATCCTTGAATGCTTACCTGAAAGAGCTGGTAGCATCCCCAGTAAGAACTTTGGCTGATGTGATCGCCTTCAACAACAAATTCTCACATTTGGAGAAAATCAAAGAATATGGACAAGACAGCTTTCTGCGAGCCGAAGCCACAAAAGGAATAAGCAAGAAAACTTTGTTAAAATTAGCAAGATTGTCAAGAAATGGATTCAAGAAGTTGATGAATGAGCATAAGCTGGATGCATTGGTGACTCCTGGTGCAGATGTTTTGGAGGATTCCCCGGAATTACTGTTCCAGCTGGATATGATAGCGAAGGAGTGCCATTTGGCATTTGTTTAA 774 0.4612 MHSSKPTRLTGTGRLSVVRKLRKVGAIILGKASLSEWAGSRFATPYGWCARAGQGRNPYVLSETPCGSSSGSAISVAANLAAVSLGTETDGSILYPSHINSLVWFQSLLGRTLLGQGGAILVDHLEIANIDVIFGSSREEATLEAEFKISLNAYLKELVASPVRTLADVIAFNNKFSHLEKIKEYGQDSFLRAEATKGISKKTLLKLARLSRNGFKKLMNEHKLDALVTPGADVLEDSPELLFQLDMIAKECHLAFV* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0153 257 PANTHER AMIDASE 17 111 - -
Vvi3g0153 257 SUPERFAMILY Amidase signature (AS) enzymes 17 232 IPR036928 -
Vvi3g0153 257 Gene3D Amidase signature (AS) domain 113 247 IPR036928 -
Vvi3g0153 257 Pfam Amidase 17 111 IPR023631 -
Vvi3g0153 257 Gene3D Amidase signature (AS) domain 13 112 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0153 Vvi-Chr3 1397866 1400744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0153 16 120 Acyl Lipid Metabolism Gene Families AT5G64440 38.532 6.40e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0153 K01426 - zju:107427585 234.572