Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0152 ATGTCCATCCATTTCCATGTCTCCACACTATTTCTCCTTCCTCTAGTCTTACTACCGTCTGGATCCATTGCCATCACAGGCCATGCATTTTCAATCGAAGAAGCAACTGTCCATGACTTCCATATGGCTTTCGAACAAAACAAACTCACCTCAAGGCAGCTGGTTGAGTTCTACCTGGGCAAGATTCACAAACTCAACCCAATTCTTCGTGGGGTAATAGAGGATAATATTGCAACCAAGGACAAGATGAACACAACAGCAGGATCATTTGCATTGCTTAAATCAGTGGTGCCAAGGGATGCAGGCGTGGTGAGGAAGTTGAGGAAGGCTGGAGCTATCATACTGGGAAAGGCTAGCCTCAGCGAGTGGGCTGCTTTTCGTGCTACTGCTACTCCTTCGGGCTGGTGTGCTAGAACTGGCCAAGGTAAGAACCCTTATGTTCTATCAGCAACTCCCTGTGGCTCAAGTAGTGGATCAGCTATATCAGTAGCAGCAAATTTAGCGGCAGTGTCTCTAGGGACGGAGACTGATGGATCCATCTTATGTCCATCCCACATTAATTCAGTAGTGGGCATCAAACCAACACTTGGTCTCACCAGCCGAGCTGGCGTGGTTCCAATCTCTCCTAGGCAGGACACTGTTGGGCCCATCTGCAGGACAGTCTCCGATGCTGTCGAGGTACTGGATGTCATTGTTGGTTTTGACTACAGGGATGAAGCAACCAGGACAGCATCCAAGTACATACCACAAGGTGGCTATAAGCAATTTCTCAATGCAAATGGGCTCAAGGGGAAGAGATTGGGGATAGTGAGGAATCCCTTCTATATGTTTGGGAATGGCTCTGTCCTCCCTCAAGTTTTTGAGCATCATTTCCACACACTCAGGCAAGGAGGTGCTATTTTGGTAGATCACCTGGAAATAGCCAACATTGATGTTATCTATGGCTCCTCCGGAGAATATGCAGCATTAGAGGCTGAGTTCAAAACATCCTTGAATGCTTACCTGAAAGAGCTGGTAGCATCCCCAGTAAGAACTTTGGCTGATGTGATAGCCTTCAACAACAAATTCTCACATTTGGAAAAGATAAAGGAGTATGGACAAGATATCTTTCTGCAAGCCGAAGCCACAAATGGGATAAACAAGAAAACTTTGTTAAAATTAGCGAGATTGTCACGAAATGGGTTTGAGAAGTTGATGAAGGAGCATAAGCTGGATGCATTGGTGACACCTGGTTCAGATGTTAGAACTATTCTTGCTATTGGAGGATTCCCTGGAATTTCTGTTCCAGCTGGATATGACAGCGAAGGAGTACCATTTGGCATTTGTTTTGGGGGCCTAAAGGGCTCTGAGCCAAAGCTGATCGAGATTGCATATAGCTTCGAGCAAGCAACTAAGATTAGGAAGCCACCTTCATTTAAACCTTGA 1425 0.4589 MSIHFHVSTLFLLPLVLLPSGSIAITGHAFSIEEATVHDFHMAFEQNKLTSRQLVEFYLGKIHKLNPILRGVIEDNIATKDKMNTTAGSFALLKSVVPRDAGVVRKLRKAGAIILGKASLSEWAAFRATATPSGWCARTGQGKNPYVLSATPCGSSSGSAISVAANLAAVSLGTETDGSILCPSHINSVVGIKPTLGLTSRAGVVPISPRQDTVGPICRTVSDAVEVLDVIVGFDYRDEATRTASKYIPQGGYKQFLNANGLKGKRLGIVRNPFYMFGNGSVLPQVFEHHFHTLRQGGAILVDHLEIANIDVIYGSSGEYAALEAEFKTSLNAYLKELVASPVRTLADVIAFNNKFSHLEKIKEYGQDIFLQAEATNGINKKTLLKLARLSRNGFEKLMKEHKLDALVTPGSDVRTILAIGGFPGISVPAGYDSEGVPFGICFGGLKGSEPKLIEIAYSFEQATKIRKPPSFKP* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0152 474 SUPERFAMILY Amidase signature (AS) enzymes 31 471 IPR036928 -
Vvi3g0152 474 PANTHER AMIDASE 74 474 - -
Vvi3g0152 474 Pfam Amidase 73 411 IPR023631 -
Vvi3g0152 474 Gene3D Amidase signature (AS) domain 21 472 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0152 Vvi-Chr3 1393183 1395922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0152 40 472 Acyl Lipid Metabolism Gene Families AT5G64440 25.054 3.39e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0152 K01426 - vvi:100252118 864.759