Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0151 ATGGACACAATGGTAATGGCAATGGCGTTTAAGATGCTTTCTCTTTTGCTCCTCTGCGGATTCTTCTTTTCCAACTCCTTTGTCATCGAAGAAGCCAACATCCAGGACATCCAATGGGCATTCTCTCAAAACAAGCTCACCTCCAGACAGCTCGTTGACTTCTACCTGCACCAGATCGAGGCCCTGAATCCGGAGCTTCGCAGCGTGATAGAGGTGAACCCAGATGCACGAGAGCAAGCGGACAAGGCCGATGCAGAAATTAAAAGCAAGAAGGAGTTGGGGGAGTTGCATGGCATACCAGTGTTGCTGAAGGACAGTATAAATACTAAAGATAAATTGAATACAACTGCTGGGTCATATGCATTGTTGGGGGCGGAGGTGAGTGGAGATGCGGCGGTGGTGGAGAGGCTGAGGAAGGCGGGGGCGGTGATACTGGGAAAGGCTAGTATGAGTGAGTGGTATCAGTTTCGTTCTTTGAAAACTCGAAACGGCTGGTGTCCAAGGAGTGGACAGGGTGTGAATCCATATGTAGCATCGGGAGAGCCATGCGGGTCAAGCAGCGGATCTGCAGTATCTGTAGCGGCCAACATGGTGGCTGTCTCGCTTGGGACGGAGACTGATGGTTCCATCATCTGCCCAGCTGATGTGAACTCCGTTGTTGGGTTTAAACCCACTGTTGGACTCACCAGTCGGACAGGTGTCATCCCAATTTCACCCCGACAAGACAGTGTCGGACCTATATGCAGGAGTGTGTTGGACGCAGTTTATGTGCTTGATGCTATAGTGGGTTTTGATCCTAGAGACGGTGAGGCAACAAAAGAAGCATCCAAGTTCATACCTGTTGGTGGCTACAAACAATTTCTCAACAAAGATGGGATTGCAGGAAAGAGATTGGGTGTTGTGAGGAATCCATTTTCTGGATTTTACAACCGATCCACAGCTATTTCAGCCTTTGAGGCTCATCTCACCGTATTAAGGCAAAGAGGTGCAATTTTAGTGGACAATTTGGAAATAGAAAATGTTGATATCATATTGAACCCCTATGAAAGTGGTGAATCAACGGCCTTGTTGGCTGAGTTCAAGCTCAACATAAATGAATACCTGAAAGAGCTCACCCATTCTCCAGTGAGGTCCCTAGCAGGCATAATTGCCTTCAACTTGAACAACTCTGATCTGGAAAAGACTGATGAAAATGGCCAGGAAGTCTTTATCGCAGCAGAGATGACAAATGGGATTGGGAAGCAAGAGAGGATGGCAATGGAGATGATGGCAAATCTGTCTCGTGATGGGTTTGAGAAGCTGATGATGGAGAATGAGCTCGATGCAACGGTGACACTGGGTTCAGGCATGGCCACTGTACTGGCCATTGGAGGTTACCCCGGAGTTAGTGTTCCAGCTGGGTATGATGGAGATGGAATGCCCTTTGGCATATGTTTTGGAGGACTGAAGGGGATGGAGCCAAAGCTTATTGAAGTTGCTTACGGATTTGAACAAGCCACAAAGATTCGGAGACCTCCCGCTTCCCCTAAGAACTTATTGTTCAATACAATAATGTCCATCCATTCCCATGTCTCCACACTATTTCTCCTTCCTCTAGTCTTACTACAGTCTGGATCCATTGCCATCACAGGCCATGCATTTTCAATCGAAGAAGCAACTGTCCATGACTTCCATATGGCTTTCGAACAAAACAAACTCACCTCAAGGCAGCTGGTTGAGTTCTACCTGGGCAAGATTCACAAACTCAACCCAATTCTTCGTGGGGTAATAGAGGTGAACCCAGATGCACTCCTCCAAGCTGATAAGGCCGACAGGGAGAGGAAGGCTAAGTTACCTGGGTCGCTGCTGGGGCTGCACGGCATTCCTATTCTGCTTAAGGATAATATTGCAACCAAGGACAAGATGAACACAACAGCAGGATCATTTGCATTGCTTAAATCAGTGGTGCCAAGGGATGCAGGCGTGGTGAGGAAGTTGAGGAAGGCTGGAGCTATCATACTGGGAAAGGCTAGCCTCAGCGAGTGGGCTTATTTTCGTGCTACTGTTATTCCTTCGGGCTGGTGTGCTAGAACTGGCCAAGGTAAGAACCCTTATGTTCTATCAGCAACTCCCTGTGGCTCAAGTAGTGGATCAGCTATATCAGTAGCAGCAAATTTAGCGGCAGTGTCTCTAGGGACGGAGACTGATGGATCCATCTTATGTCCATCCCACGTTAATTCAGTAGTGGGCATCAAACCAACACTTGGTCTCACCAGCCGAGCTGGCGTGGTTCCAATCTCTCCTAGGCAGGACACTGTTGGGCCCATCTGCAGGACAGTCTCCGATGCTGTAGAGGTACTGGATGTCATTGTTGGTTTTGACTACAGGGATGAAGCAACCAGGACATCATCCAAGTACATACCACAAGGTGGCTATAAGCAATTTCTCAATGCAAATGGACTCAAGGGGAAGAGATTGGGGATAGTGAGGAATCCCTTCTATATGTTTGAGAATGGCTCTGTCCTGCCTCAAGTTTTTGAGCATCATTTCCACACACTAAGGCAAGGAGGTGCTATTTTGGTAGACCACCTGGAAATAGCCAACATTGATGTTATCTATGGCTCCTCCGGAGAAGGTGCAGCATTAGAGGCTGAGTTCAAAATATCCTTGAATGCTTACCTGAAAGAGCTGGTAGCATCCCCAGTAAGAACTTTGGCTGATGTGATAGCCTTCAACAACAAATTCTCACATTTGGAAAAGATCAAGGAGTATGGACAAGATACCTTTCTGCAGGCCGAAGCCACAAATGGGATAAACAAGAAAACTTTGTTAAAATTAGCAAGATTGTCACGAAATGGATTTGAGAAGTTGATGAAGGAGCATAAGCTGGATGCATTGGTGACTCCTGGTTCAAATGTGAGTCCTGTTCTTGCTATTGGAGGATTCCCTGGAATTTCTGTTCCAGCTGGATATGATAGCAAAGGAGTACCATTTGGCATTTGTTTTGGGGGCCTAAAGGGCTCTGAGCCAAAGCTAATCGAGATTGCATATAGCTTCGAGCAAGCAACTAAGATTAGGAAGCCACCTTCATTTAAACCTTGA 3081 0.4703 MDTMVMAMAFKMLSLLLLCGFFFSNSFVIEEANIQDIQWAFSQNKLTSRQLVDFYLHQIEALNPELRSVIEVNPDAREQADKADAEIKSKKELGELHGIPVLLKDSINTKDKLNTTAGSYALLGAEVSGDAAVVERLRKAGAVILGKASMSEWYQFRSLKTRNGWCPRSGQGVNPYVASGEPCGSSSGSAVSVAANMVAVSLGTETDGSIICPADVNSVVGFKPTVGLTSRTGVIPISPRQDSVGPICRSVLDAVYVLDAIVGFDPRDGEATKEASKFIPVGGYKQFLNKDGIAGKRLGVVRNPFSGFYNRSTAISAFEAHLTVLRQRGAILVDNLEIENVDIILNPYESGESTALLAEFKLNINEYLKELTHSPVRSLAGIIAFNLNNSDLEKTDENGQEVFIAAEMTNGIGKQERMAMEMMANLSRDGFEKLMMENELDATVTLGSGMATVLAIGGYPGVSVPAGYDGDGMPFGICFGGLKGMEPKLIEVAYGFEQATKIRRPPASPKNLLFNTIMSIHSHVSTLFLLPLVLLQSGSIAITGHAFSIEEATVHDFHMAFEQNKLTSRQLVEFYLGKIHKLNPILRGVIEVNPDALLQADKADRERKAKLPGSLLGLHGIPILLKDNIATKDKMNTTAGSFALLKSVVPRDAGVVRKLRKAGAIILGKASLSEWAYFRATVIPSGWCARTGQGKNPYVLSATPCGSSSGSAISVAANLAAVSLGTETDGSILCPSHVNSVVGIKPTLGLTSRAGVVPISPRQDTVGPICRTVSDAVEVLDVIVGFDYRDEATRTSSKYIPQGGYKQFLNANGLKGKRLGIVRNPFYMFENGSVLPQVFEHHFHTLRQGGAILVDHLEIANIDVIYGSSGEGAALEAEFKISLNAYLKELVASPVRTLADVIAFNNKFSHLEKIKEYGQDTFLQAEATNGINKKTLLKLARLSRNGFEKLMKEHKLDALVTPGSNVSPVLAIGGFPGISVPAGYDSKGVPFGICFGGLKGSEPKLIEIAYSFEQATKIRKPPSFKP* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0151 1026 SUPERFAMILY Amidase signature (AS) enzymes 31 506 IPR036928 -
Vvi3g0151 1026 PANTHER AMIDASE 529 1026 - -
Vvi3g0151 1026 Gene3D Amidase signature (AS) domain 536 1024 IPR036928 -
Vvi3g0151 1026 Gene3D Amidase signature (AS) domain 22 507 IPR036928 -
Vvi3g0151 1026 Pfam Amidase 571 968 IPR023631 -
Vvi3g0151 1026 Pfam Amidase 51 429 IPR023631 -
Vvi3g0151 1026 SUPERFAMILY Amidase signature (AS) enzymes 548 1023 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0151 Vvi-Chr3 1384164 1391096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0151 561 794 Acyl Lipid Metabolism Gene Families AT5G07360 32.627 4.59e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0151 K01426 - vvi:100260628 986.097