Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0149 ATGGTGGCCGTCTCGCTTGGGACTGAGACCAATGGTTCCATCATCTGCCCAGCTGATCATAACTCCGTTATAGGGTTTAAGCCCACCGTTGGACTCACCAGTCGGGCAGGCGTCATCCCTATTTCACCCCGGCAAGACAGTGTTGGGACTGTGTCGGATGCGGTTTATGTGCTGGATGCTATAGTAGGTTTCGACCCTAGAGATAGCCAGGCAATAGAAGAAGCATCAAAGTTCATACCGAATGGTGGCTACAAACAATTTTTCAACAAAGATGGGCTTACTGGAAAGAGATTGGGTGTTGTGAGGAATCCATTTTCTTACTTTTACAATGAATCCACTGCTATTCTAGCCTTTGAGGCTCATCTGAACACATTAAGGCAAAGGGGTGCAATTTTAGTGGACAATCTGGAAAAAGAAAATATTGATATCATCATGGACCCGAATGAATGTGGTGAATCAACGGCCTTGTTGGCTGAGTTGAAGCTCAACATAAATGGGTATCTAAGAGAGCTCACCAGCTCTCCAGTGAGGTCCTTAGCAGACATTATTGCCTTCAACTTGAACAGCTCTGATCTAAGAAGACTGATGAATATGGACAGGAAGTCTTTATGGCATCAGAGATGA 624 0.4503 MVAVSLGTETNGSIICPADHNSVIGFKPTVGLTSRAGVIPISPRQDSVGTVSDAVYVLDAIVGFDPRDSQAIEEASKFIPNGGYKQFFNKDGLTGKRLGVVRNPFSYFYNESTAILAFEAHLNTLRQRGAILVDNLEKENIDIIMDPNECGESTALLAELKLNINGYLRELTSSPVRSLADIIAFNLNSSDLRRLMNMDRKSLWHQR* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0149 207 Gene3D Amidase signature (AS) domain 1 207 IPR036928 -
Vvi3g0149 207 PANTHER AMIDASE 1 201 - -
Vvi3g0149 207 Pfam Amidase 2 144 IPR023631 -
Vvi3g0149 207 SUPERFAMILY Amidase signature (AS) enzymes 1 189 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0149 Vvi-Chr3 1367364 1369340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0149 1 75 Acyl Lipid Metabolism Gene Families AT5G07360 39.241 4.42e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0149 K01426 - vvi:100248659 379.407