Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0143 ATGAAGATATTGTTTCAATACTACATTGAACGACAGTGCTTGCTGAAGTGTACCAGACAGATTTTCATGCATGCTCTATATGTTGGAAGTGGCTCTGAAGAGGGTAATGCCATTAGGCAGGAGGCGCAAAGCCTGATTTCTGATGGATTAGAGAGCAAATTATTATCTGTCCTCCATGACCTTCTATCATCCAGCCATCCAGAGCACATGGATATTGACCTATTCACTTTATGGGCTGAAGAGACACTTATTGAAGACAATTTGATCTTGGACATTCTTTTCCTTGCCTATTATGAGTCATTTTGTGTTTGTAATGGTGCACAGTGGAAAAAATTGTGCTTGCTTTACAAGGGAATCATTTCTGGGTCTTTTAACTTCGGAAAGCTGGCAATTTCACCTGAAGCAACACATTCTTTTTATCACGCTAAAGTTCAGCTGCTACTCATCCTTATAGAAACCCTGGACCTGGAAAATCTTCTTCAATTGATTCATGATGAAATGCCTTTCAGGGAGGGTTGCACTTTGTTTTCCTTGACTGATGTCCAAGAAATAGATGCAATAATATCAGGTTTCAATGCTTTTGAAACAAAGGAAGCAGGCCCACTAATTCTTACATGGGCTGTGTTTCTCTGCCTTATTTCATCACTTCCTGGAAAACAGGAAAATAGTGTGCTAATGGATATTGATCATGTCGGTTATGTTCGTCAAGCCTTTGAGGCTGCATCATTGAGTTATTTTCTTGAACTTCTTCAAAGTGACATATTGAAGGATTCAGATGGACCTGTTGCTGGTTATAGGAGTGTCTTGAGAACTTTTGTCTCTGCATTTATTGCATCTTATGAGATAAATGTTCAGGTAGCTGTATTATGCATCTTTAGCTTGTAA 885 0.3898 MKILFQYYIERQCLLKCTRQIFMHALYVGSGSEEGNAIRQEAQSLISDGLESKLLSVLHDLLSSSHPEHMDIDLFTLWAEETLIEDNLILDILFLAYYESFCVCNGAQWKKLCLLYKGIISGSFNFGKLAISPEATHSFYHAKVQLLLILIETLDLENLLQLIHDEMPFREGCTLFSLTDVQEIDAIISGFNAFETKEAGPLILTWAVFLCLISSLPGKQENSVLMDIDHVGYVRQAFEAASLSYFLELLQSDILKDSDGPVAGYRSVLRTFVSAFIASYEINVQVAVLCIFSL* 295
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0143 294 PANTHER NUCLEOPORIN NUP188 HOMOLOG 3 291 IPR044840 GO:0017056
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g0143 Vvi-Chr3 1309921 1320293 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0143 K14311 - vvi:100264071 537.339