Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0141 ATGGGATCACTTCACATCTGTGAAGGATCACACCTGGGCTTCTGGGTGTTCTTGCTTTTTTCTGTGAGCTTCTGCTATGGCAATGCTGATCAAGTTCAGGTAGTTGGAATTGTAGAATGTGCAGACTGTTCTGAGAGTCATATTAAGGCTAGCCAAGCCTTTTCAGGACTTGGTGTGACCATTGACTGCAAGCTAGCAAATGGAGAGTTCAAAACAAGGGCATTTGGAGTGGTCAGCAATGAAGGAAAATTCAAGGTGTCTCTCCCTGAGGAGATGGTGAAGGATGGATATCAGTTGAAAGAAGAATGCTTTGCACAGCTTCACAGTGCCTCAGCAGCACCATGTTCTGATGCACAGAGCGGCCTAAAGGCCTCCAAGATTGTCTTGAAGGCGAAAACTATTGGGAAGAAAAACGACTTTGGCCCAATCGAAAATCTAAAATTCTCTTCTCTAACTTGCACTTCAGCCCTTTGGTGGTCTTTCTACAAGCATCCTCCCCTGCCCAAGCTGCCACTGCCCTTCCCCAAGGCCTATCCTCCACCTTGGAAGAAATTTGGCCATGTCTACAAGAAACCACTTCCACCATCAATACCAATATACAAAAAGCCCCTCCCATCTCCAGTCCACAAGAAGCTGCTTCCACCCAAGGTACTCATACACAAGAAGCCTCTTCCACCAAAAGTACTGAAACCCAATAAGCCATTCCCACCACCTTCGCCAGTTTACAAGAAGCCTTTTCCTCCATCTGTACCGGTTTTTAAGAAACCAATCCCACCACCTGTTCCAGTATACAAGAGACTTCCTCCGCCCCCTACGCCCGTTTATCAGAAACGGTTGCCACCACCAGTTCCGGTGTTCCAGAAGCCTTGTCCACCGCCTGTTCCCATAGCTAAGAAGTTGCTTCCACCCCATGTCCCCATATACAAAAAGCCGCTTCTGCCTCCCACTCCAATCTACAATAAGCCAAATCCACCACCATTCTATAAATGGTCAATTCACAAGATAATACCACCAGTCTACAAACTTCTTCCTCCAATCCCTCCACTTTACAAGAAGCCATGTCCACCCATTCTTAAGCCTCCTCATTATCTTCCTAAGCTTCCTCCAAAGCACTTCCCCCTCCCCAAGTTTGGACCCAATCCTCCTATACCACCTTATATCCCTCATCCTTAA 1173 0.4706 MGSLHICEGSHLGFWVFLLFSVSFCYGNADQVQVVGIVECADCSESHIKASQAFSGLGVTIDCKLANGEFKTRAFGVVSNEGKFKVSLPEEMVKDGYQLKEECFAQLHSASAAPCSDAQSGLKASKIVLKAKTIGKKNDFGPIENLKFSSLTCTSALWWSFYKHPPLPKLPLPFPKAYPPPWKKFGHVYKKPLPPSIPIYKKPLPSPVHKKLLPPKVLIHKKPLPPKVLKPNKPFPPPSPVYKKPFPPSVPVFKKPIPPPVPVYKRLPPPPTPVYQKRLPPPVPVFQKPCPPPVPIAKKLLPPHVPIYKKPLLPPTPIYNKPNPPPFYKWSIHKIIPPVYKLLPPIPPLYKKPCPPILKPPHYLPKLPPKHFPLPKFGPNPPIPPYIPHP* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0141 390 PANTHER OS10G0148100 PROTEIN 18 277 - -
Vvi3g0141 390 Pfam Pollen protein Ole e 1 like 34 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0141 Vvi-Chr3 1301501 1302755 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0141 - - vvi:100241790 396.356