Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0140 ATGGGATCACCTCCCATTTGTGGAGGAACACTTCTGGGCTTCTGGGTGTTCCTGCTTTTTTCTGTGATCTTCTGCTATGGCAGTGCTGATCAATTTGAGGTAGTTGGAGTTGTAGAATGTGCAGACTGTTCTGAGAGTCGTATTAAGGCTAGCCCAGCCTTTTCAGGGCTTGGTGTGACCATTGACTGCAAGCTAGCAAATGGAGAGTTCAAAACAAGGGCAGTTGGAGATGTCAGCAATGAAGGAAAATTCAAGGTGTCTCTCCCTGAGGAGATGGTGAAGGATGGATATCAGTTGAAAGAAGAATGCTTTGCACAGCTTCACAGTGCCTCAGCAGCACCATGTCCTGATGCACAGAGCGGCCTAGAGGCCTCCAAGATAGTCTTGAAGGCGAAAACTATTGGGAAGAAAAACGTATTTGGCCCAATCGCAAATCTAAAATTCTCTTCTCTAACTTGCACTTCAGCCCTTTGGTGGTCTTTCTACAAGCATCCTCCCCTGCCCAAGCTGCCACTGCCCTTTCCCAAGGCCTATCCTCCACCTTGGAAGAAATTTGGCCATGTCTACAAGAAGCCACTTCCACCATCAATACCAATATACAAAAAGCCCCTCCCATCTCCAGTCCACAAGAAGCTGCTTCCACCCAAGGTACTCATACACAAGAAGCCTCTTCCACCAAAAGTACTGAAACCCAATAAGCCATTCCCACCACCTTCGCCAGTTTACAAGAAGCCTTTTCCTCCATCTGTACCAGTTTTTAAGAAACCAATCCCACCACCTGTTCCAGTGTACAAAAGACTTCCTCCGCCCCCTGCGCCCGTTTATCAGAAACGGTTGCCGCCACCAGTTCCGGTGTTCAAGAAGCCTTGTCCACCGCCTGTTCCCATAGCTAAGAAGTTGCTTCCACCCCATGTCCCCATATACAAAAAGCCGCTTCTGCCTCCCACTCCAATCTACAATAAGCCAAATCCACCACCATTCTATAAATGGTCAATTCACAAGCCAATACCACCAGTCTACAAACTTCTTCCTCCAATCCCTCCACTTTACAAGAAGCCATGTCCACCCATTCTTAAGCCTCCTCATTATCTTCCTAAGCTTCCTCCAAAGCTCTTTCCCTTCCCCAAGTTCGGACCCTATCCTCCTATACAACCTTATTTCCCTCATCCTTAA 1173 0.4766 MGSPPICGGTLLGFWVFLLFSVIFCYGSADQFEVVGVVECADCSESRIKASPAFSGLGVTIDCKLANGEFKTRAVGDVSNEGKFKVSLPEEMVKDGYQLKEECFAQLHSASAAPCPDAQSGLEASKIVLKAKTIGKKNVFGPIANLKFSSLTCTSALWWSFYKHPPLPKLPLPFPKAYPPPWKKFGHVYKKPLPPSIPIYKKPLPSPVHKKLLPPKVLIHKKPLPPKVLKPNKPFPPPSPVYKKPFPPSVPVFKKPIPPPVPVYKRLPPPPAPVYQKRLPPPVPVFKKPCPPPVPIAKKLLPPHVPIYKKPLLPPTPIYNKPNPPPFYKWSIHKPIPPVYKLLPPIPPLYKKPCPPILKPPHYLPKLPPKLFPFPKFGPYPPIQPYFPHP* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0140 390 Pfam Pollen protein Ole e 1 like 34 119 - -
Vvi3g0140 390 PANTHER OS10G0148100 PROTEIN 10 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0140 Vvi-Chr3 1298261 1299515 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0140 - - vvi:100246920 395.971